Protein–RNA interactions for Protein: P61009

SPCS3, Signal peptidase complex subunit 3, humanhuman

Predictions only

Length 180 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS3P61009 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SPCS3P61009 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC15.65■□□□□ 0.1
SPCS3P61009 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SPCS3P61009 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC15.65■□□□□ 0.1
SPCS3P61009 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SPCS3P61009 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC15.65■□□□□ 0.1
SPCS3P61009 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC15.65■□□□□ 0.1
SPCS3P61009 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SPCS3P61009 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SPCS3P61009 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SPCS3P61009 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
SPCS3P61009 GXYLT1P2-201ENST00000433312 1230 ntBASIC15.65■□□□□ 0.1
SPCS3P61009 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC15.65■□□□□ 0.1
SPCS3P61009 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
SPCS3P61009 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC15.65■□□□□ 0.1
SPCS3P61009 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC15.65■□□□□ 0.1
SPCS3P61009 AC231657.2-201ENST00000624556 255 ntBASIC15.65■□□□□ 0.1
SPCS3P61009 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC15.65■□□□□ 0.1
SPCS3P61009 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
SPCS3P61009 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SPCS3P61009 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC15.65■□□□□ 0.1
SPCS3P61009 AC010980.2-201ENST00000587099 1412 ntBASIC15.65■□□□□ 0.1
SPCS3P61009 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC15.65■□□□□ 0.1
SPCS3P61009 BCL2-203ENST00000589955 5011 ntBASIC15.65■□□□□ 0.1
SPCS3P61009 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC15.65■□□□□ 0.1
SPCS3P61009 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
SPCS3P61009 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC15.65■□□□□ 0.1
SPCS3P61009 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC15.65■□□□□ 0.1
SPCS3P61009 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
SPCS3P61009 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SPCS3P61009 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC15.65■□□□□ 0.1
SPCS3P61009 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
SPCS3P61009 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SPCS3P61009 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
SPCS3P61009 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
SPCS3P61009 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SPCS3P61009 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC15.64■□□□□ 0.09
SPCS3P61009 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
SPCS3P61009 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SPCS3P61009 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC15.64■□□□□ 0.09
SPCS3P61009 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SPCS3P61009 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SPCS3P61009 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC15.64■□□□□ 0.09
SPCS3P61009 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SPCS3P61009 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
SPCS3P61009 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SPCS3P61009 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
SPCS3P61009 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SPCS3P61009 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
SPCS3P61009 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SPCS3P61009 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SPCS3P61009 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC15.64■□□□□ 0.09
SPCS3P61009 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC15.64■□□□□ 0.09
SPCS3P61009 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
SPCS3P61009 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SPCS3P61009 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC15.64■□□□□ 0.09
SPCS3P61009 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC15.64■□□□□ 0.09
SPCS3P61009 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
SPCS3P61009 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
SPCS3P61009 AC011767.1-201ENST00000617410 1153 ntBASIC15.64■□□□□ 0.09
SPCS3P61009 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC15.64■□□□□ 0.09
SPCS3P61009 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC15.64■□□□□ 0.09
SPCS3P61009 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
SPCS3P61009 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SPCS3P61009 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SPCS3P61009 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
SPCS3P61009 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC15.64■□□□□ 0.09
SPCS3P61009 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC15.64■□□□□ 0.09
SPCS3P61009 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SPCS3P61009 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SPCS3P61009 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
SPCS3P61009 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
SPCS3P61009 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC15.64■□□□□ 0.09
SPCS3P61009 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SPCS3P61009 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
SPCS3P61009 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
SPCS3P61009 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
SPCS3P61009 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC15.63■□□□□ 0.09
SPCS3P61009 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
SPCS3P61009 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC15.63■□□□□ 0.09
SPCS3P61009 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
SPCS3P61009 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
SPCS3P61009 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
SPCS3P61009 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
SPCS3P61009 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
SPCS3P61009 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
SPCS3P61009 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC15.63■□□□□ 0.09
SPCS3P61009 PLD4-205ENST00000553861 667 ntTSL 2 BASIC15.63■□□□□ 0.09
SPCS3P61009 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC15.63■□□□□ 0.09
SPCS3P61009 MIR6821-201ENST00000617625 74 ntBASIC15.63■□□□□ 0.09
SPCS3P61009 PARP1-210ENST00000629232 477 ntTSL 5 BASIC15.63■□□□□ 0.09
SPCS3P61009 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC15.63■□□□□ 0.09
SPCS3P61009 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
SPCS3P61009 AC141586.3-201ENST00000562166 1838 ntBASIC15.63■□□□□ 0.09
SPCS3P61009 AL161938.1-201ENST00000569833 2180 ntBASIC15.63■□□□□ 0.09
SPCS3P61009 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC15.63■□□□□ 0.09
SPCS3P61009 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
SPCS3P61009 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC15.63■□□□□ 0.09
SPCS3P61009 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
SPCS3P61009 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC15.63■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 23 ms