Protein–RNA interactions for Protein: P56880

CLDN20, Claudin-20, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN20P56880 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
CLDN20P56880 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
CLDN20P56880 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CLDN20P56880 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC17.66■□□□□ 0.42
CLDN20P56880 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
CLDN20P56880 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC17.66■□□□□ 0.42
CLDN20P56880 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CLDN20P56880 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
CLDN20P56880 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC17.65■□□□□ 0.42
CLDN20P56880 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CLDN20P56880 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC17.65■□□□□ 0.42
CLDN20P56880 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
CLDN20P56880 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CLDN20P56880 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
CLDN20P56880 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC17.65■□□□□ 0.42
CLDN20P56880 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CLDN20P56880 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CLDN20P56880 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
CLDN20P56880 AC093503.3-201ENST00000624917 2352 ntBASIC17.65■□□□□ 0.42
CLDN20P56880 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC17.65■□□□□ 0.42
CLDN20P56880 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CLDN20P56880 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
CLDN20P56880 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC17.65■□□□□ 0.42
CLDN20P56880 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CLDN20P56880 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
CLDN20P56880 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC17.65■□□□□ 0.42
CLDN20P56880 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC17.65■□□□□ 0.42
CLDN20P56880 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC17.65■□□□□ 0.42
CLDN20P56880 REXO2-216ENST00000544196 452 ntTSL 3 BASIC17.65■□□□□ 0.42
CLDN20P56880 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC17.65■□□□□ 0.42
CLDN20P56880 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC17.65■□□□□ 0.42
CLDN20P56880 RARRES2P10-201ENST00000564312 460 ntBASIC17.65■□□□□ 0.42
CLDN20P56880 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
CLDN20P56880 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CLDN20P56880 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CLDN20P56880 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CLDN20P56880 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC17.65■□□□□ 0.42
CLDN20P56880 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC17.65■□□□□ 0.42
CLDN20P56880 HTR7P1-201ENST00000538670 1336 ntBASIC17.65■□□□□ 0.42
CLDN20P56880 AC009237.14-201ENST00000609975 1594 ntBASIC17.65■□□□□ 0.42
CLDN20P56880 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CLDN20P56880 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CLDN20P56880 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
CLDN20P56880 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CLDN20P56880 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC17.65■□□□□ 0.42
CLDN20P56880 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.42
CLDN20P56880 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
CLDN20P56880 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC17.64■□□□□ 0.42
CLDN20P56880 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
CLDN20P56880 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC17.64■□□□□ 0.42
CLDN20P56880 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC17.64■□□□□ 0.41
CLDN20P56880 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
CLDN20P56880 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
CLDN20P56880 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
CLDN20P56880 LBX2-AS1-202ENST00000603175 2083 ntBASIC17.64■□□□□ 0.41
CLDN20P56880 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC17.64■□□□□ 0.41
CLDN20P56880 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CLDN20P56880 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CLDN20P56880 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC17.64■□□□□ 0.41
CLDN20P56880 MIR718-201ENST00000390190 70 ntBASIC17.64■□□□□ 0.41
CLDN20P56880 RPS2P55-201ENST00000397318 883 ntBASIC17.64■□□□□ 0.41
CLDN20P56880 AC107956.1-201ENST00000494359 873 ntBASIC17.64■□□□□ 0.41
CLDN20P56880 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC17.64■□□□□ 0.41
CLDN20P56880 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC17.64■□□□□ 0.41
CLDN20P56880 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC17.64■□□□□ 0.41
CLDN20P56880 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CLDN20P56880 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CLDN20P56880 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CLDN20P56880 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC17.64■□□□□ 0.41
CLDN20P56880 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
CLDN20P56880 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC17.64■□□□□ 0.41
CLDN20P56880 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CLDN20P56880 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CLDN20P56880 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CLDN20P56880 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
CLDN20P56880 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
CLDN20P56880 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CLDN20P56880 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
CLDN20P56880 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CLDN20P56880 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC17.64■□□□□ 0.41
CLDN20P56880 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CLDN20P56880 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
CLDN20P56880 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
CLDN20P56880 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CLDN20P56880 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CLDN20P56880 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC17.63■□□□□ 0.41
CLDN20P56880 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
CLDN20P56880 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CLDN20P56880 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC17.63■□□□□ 0.41
CLDN20P56880 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CLDN20P56880 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CLDN20P56880 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CLDN20P56880 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
CLDN20P56880 TMEM179-206ENST00000616017 1645 ntBASIC17.63■□□□□ 0.41
CLDN20P56880 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CLDN20P56880 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
CLDN20P56880 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CLDN20P56880 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CLDN20P56880 KRT18P16-201ENST00000510337 1294 ntBASIC17.63■□□□□ 0.41
CLDN20P56880 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC17.63■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms