Protein–RNA interactions for Protein: P49643

PRIM2, DNA primase large subunit, humanhuman

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRIM2P49643 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
PRIM2P49643 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PRIM2P49643 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PRIM2P49643 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
PRIM2P49643 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PRIM2P49643 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC18.32■□□□□ 0.52
PRIM2P49643 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PRIM2P49643 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
PRIM2P49643 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
PRIM2P49643 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
PRIM2P49643 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
PRIM2P49643 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC18.31■□□□□ 0.52
PRIM2P49643 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
PRIM2P49643 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
PRIM2P49643 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC18.31■□□□□ 0.52
PRIM2P49643 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
PRIM2P49643 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
PRIM2P49643 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC18.31■□□□□ 0.52
PRIM2P49643 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
PRIM2P49643 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC18.31■□□□□ 0.52
PRIM2P49643 SLC29A4P2-201ENST00000504749 1089 ntBASIC18.31■□□□□ 0.52
PRIM2P49643 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC18.31■□□□□ 0.52
PRIM2P49643 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
PRIM2P49643 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
PRIM2P49643 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC18.31■□□□□ 0.52
PRIM2P49643 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PRIM2P49643 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
PRIM2P49643 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC18.31■□□□□ 0.52
PRIM2P49643 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
PRIM2P49643 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PRIM2P49643 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
PRIM2P49643 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
PRIM2P49643 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PRIM2P49643 AC026471.1-201ENST00000564629 3026 ntBASIC18.31■□□□□ 0.52
PRIM2P49643 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC18.3■□□□□ 0.52
PRIM2P49643 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
PRIM2P49643 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PRIM2P49643 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
PRIM2P49643 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC18.3■□□□□ 0.52
PRIM2P49643 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC18.3■□□□□ 0.52
PRIM2P49643 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC18.3■□□□□ 0.52
PRIM2P49643 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
PRIM2P49643 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
PRIM2P49643 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PRIM2P49643 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PRIM2P49643 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
PRIM2P49643 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
PRIM2P49643 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PRIM2P49643 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
PRIM2P49643 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC18.3■□□□□ 0.52
PRIM2P49643 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
PRIM2P49643 INO80E-214ENST00000620599 515 ntTSL 2 BASIC18.3■□□□□ 0.52
PRIM2P49643 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC18.3■□□□□ 0.52
PRIM2P49643 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PRIM2P49643 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC18.3■□□□□ 0.52
PRIM2P49643 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC18.3■□□□□ 0.52
PRIM2P49643 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PRIM2P49643 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PRIM2P49643 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PRIM2P49643 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
PRIM2P49643 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PRIM2P49643 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC18.3■□□□□ 0.52
PRIM2P49643 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
PRIM2P49643 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
PRIM2P49643 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PRIM2P49643 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
PRIM2P49643 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
PRIM2P49643 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
PRIM2P49643 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PRIM2P49643 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PRIM2P49643 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PRIM2P49643 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
PRIM2P49643 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PRIM2P49643 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PRIM2P49643 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PRIM2P49643 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PRIM2P49643 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
PRIM2P49643 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC18.29■□□□□ 0.52
PRIM2P49643 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC18.29■□□□□ 0.52
PRIM2P49643 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC18.29■□□□□ 0.52
PRIM2P49643 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC18.29■□□□□ 0.52
PRIM2P49643 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PRIM2P49643 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC18.29■□□□□ 0.52
PRIM2P49643 EMC9-206ENST00000560403 872 ntTSL 2 BASIC18.29■□□□□ 0.52
PRIM2P49643 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC18.29■□□□□ 0.52
PRIM2P49643 SOX15-203ENST00000570788 1093 ntBASIC18.29■□□□□ 0.52
PRIM2P49643 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC18.29■□□□□ 0.52
PRIM2P49643 AC120498.8-201ENST00000614275 531 ntBASIC18.29■□□□□ 0.52
PRIM2P49643 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
PRIM2P49643 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
PRIM2P49643 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC18.29■□□□□ 0.52
PRIM2P49643 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC18.29■□□□□ 0.52
PRIM2P49643 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
PRIM2P49643 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
PRIM2P49643 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
PRIM2P49643 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
PRIM2P49643 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
PRIM2P49643 AC124283.5-201ENST00000624661 1809 ntBASIC18.28■□□□□ 0.52
PRIM2P49643 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
PRIM2P49643 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC18.28■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 45.8 ms