Protein–RNA interactions for Protein: P49450

CENPA, Histone H3-like centromeric protein A, humanhuman

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CENPAP49450 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC17.44■□□□□ 0.38
CENPAP49450 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CENPAP49450 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC17.44■□□□□ 0.38
CENPAP49450 TP73-202ENST00000354437 2140 ntTSL 5 BASIC17.44■□□□□ 0.38
CENPAP49450 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CENPAP49450 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC17.44■□□□□ 0.38
CENPAP49450 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC17.44■□□□□ 0.38
CENPAP49450 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
CENPAP49450 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CENPAP49450 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
CENPAP49450 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
CENPAP49450 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CENPAP49450 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
CENPAP49450 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CENPAP49450 PPP1R14BP3-201ENST00000509033 445 ntBASIC17.44■□□□□ 0.38
CENPAP49450 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC17.44■□□□□ 0.38
CENPAP49450 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
CENPAP49450 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC17.44■□□□□ 0.38
CENPAP49450 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC17.44■□□□□ 0.38
CENPAP49450 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
CENPAP49450 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
CENPAP49450 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
CENPAP49450 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC17.44■□□□□ 0.38
CENPAP49450 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
CENPAP49450 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CENPAP49450 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CENPAP49450 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CENPAP49450 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CENPAP49450 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
CENPAP49450 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC17.44■□□□□ 0.38
CENPAP49450 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CENPAP49450 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC17.44■□□□□ 0.38
CENPAP49450 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC17.44■□□□□ 0.38
CENPAP49450 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC17.44■□□□□ 0.38
CENPAP49450 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC17.44■□□□□ 0.38
CENPAP49450 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
CENPAP49450 NFIC-211ENST00000641145 8399 ntBASIC17.43■□□□□ 0.38
CENPAP49450 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC17.43■□□□□ 0.38
CENPAP49450 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CENPAP49450 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
CENPAP49450 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC17.43■□□□□ 0.38
CENPAP49450 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
CENPAP49450 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CENPAP49450 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CENPAP49450 AP000974.1-201ENST00000623909 2387 ntBASIC17.43■□□□□ 0.38
CENPAP49450 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CENPAP49450 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
CENPAP49450 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CENPAP49450 RER1-204ENST00000378518 522 ntTSL 3 BASIC17.43■□□□□ 0.38
CENPAP49450 GGT1-206ENST00000404223 952 ntTSL 2 BASIC17.43■□□□□ 0.38
CENPAP49450 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC17.43■□□□□ 0.38
CENPAP49450 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC17.43■□□□□ 0.38
CENPAP49450 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC17.43■□□□□ 0.38
CENPAP49450 BET1L-207ENST00000529614 560 ntTSL 5 BASIC17.43■□□□□ 0.38
CENPAP49450 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC17.43■□□□□ 0.38
CENPAP49450 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC17.43■□□□□ 0.38
CENPAP49450 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CENPAP49450 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CENPAP49450 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
CENPAP49450 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CENPAP49450 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC17.43■□□□□ 0.38
CENPAP49450 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
CENPAP49450 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC17.43■□□□□ 0.38
CENPAP49450 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
CENPAP49450 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
CENPAP49450 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
CENPAP49450 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC17.43■□□□□ 0.38
CENPAP49450 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
CENPAP49450 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
CENPAP49450 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CENPAP49450 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC17.42■□□□□ 0.38
CENPAP49450 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CENPAP49450 AC098818.2-201ENST00000564925 2320 ntBASIC17.42■□□□□ 0.38
CENPAP49450 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
CENPAP49450 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CENPAP49450 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC17.42■□□□□ 0.38
CENPAP49450 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
CENPAP49450 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CENPAP49450 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CENPAP49450 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CENPAP49450 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CENPAP49450 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CENPAP49450 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC17.42■□□□□ 0.38
CENPAP49450 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CENPAP49450 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CENPAP49450 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC17.42■□□□□ 0.38
CENPAP49450 PFKL-212ENST00000628044 129 ntTSL 3 BASIC17.42■□□□□ 0.38
CENPAP49450 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
CENPAP49450 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC17.42■□□□□ 0.38
CENPAP49450 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CENPAP49450 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CENPAP49450 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC17.42■□□□□ 0.38
CENPAP49450 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CENPAP49450 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
CENPAP49450 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CENPAP49450 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC17.42■□□□□ 0.38
CENPAP49450 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CENPAP49450 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
CENPAP49450 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
CENPAP49450 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 41.3 ms