Protein–RNA interactions for Protein: P31275

HOXC12, Homeobox protein Hox-C12, humanhuman

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC12P31275 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
HOXC12P31275 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC17.1■□□□□ 0.33
HOXC12P31275 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
HOXC12P31275 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
HOXC12P31275 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
HOXC12P31275 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC17.1■□□□□ 0.33
HOXC12P31275 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC17.1■□□□□ 0.33
HOXC12P31275 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC17.1■□□□□ 0.33
HOXC12P31275 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC17.1■□□□□ 0.33
HOXC12P31275 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC17.1■□□□□ 0.33
HOXC12P31275 AC073195.1-201ENST00000607241 877 ntBASIC17.1■□□□□ 0.33
HOXC12P31275 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC17.1■□□□□ 0.33
HOXC12P31275 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC17.1■□□□□ 0.33
HOXC12P31275 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
HOXC12P31275 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC17.1■□□□□ 0.33
HOXC12P31275 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
HOXC12P31275 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
HOXC12P31275 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC17.1■□□□□ 0.33
HOXC12P31275 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
HOXC12P31275 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
HOXC12P31275 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
HOXC12P31275 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
HOXC12P31275 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
HOXC12P31275 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
HOXC12P31275 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
HOXC12P31275 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
HOXC12P31275 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
HOXC12P31275 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
HOXC12P31275 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
HOXC12P31275 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
HOXC12P31275 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC17.09■□□□□ 0.33
HOXC12P31275 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
HOXC12P31275 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC17.09■□□□□ 0.33
HOXC12P31275 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC17.09■□□□□ 0.33
HOXC12P31275 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
HOXC12P31275 NME3-204ENST00000563498 920 ntTSL 2 BASIC17.09■□□□□ 0.33
HOXC12P31275 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC17.09■□□□□ 0.33
HOXC12P31275 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
HOXC12P31275 DECR2-212ENST00000627716 352 ntTSL 2 BASIC17.09■□□□□ 0.33
HOXC12P31275 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
HOXC12P31275 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
HOXC12P31275 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
HOXC12P31275 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
HOXC12P31275 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC17.09■□□□□ 0.33
HOXC12P31275 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
HOXC12P31275 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
HOXC12P31275 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
HOXC12P31275 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC17.09■□□□□ 0.33
HOXC12P31275 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
HOXC12P31275 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
HOXC12P31275 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC17.09■□□□□ 0.33
HOXC12P31275 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
HOXC12P31275 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
HOXC12P31275 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC17.09■□□□□ 0.33
HOXC12P31275 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC17.09■□□□□ 0.33
HOXC12P31275 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
HOXC12P31275 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
HOXC12P31275 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
HOXC12P31275 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC17.08■□□□□ 0.33
HOXC12P31275 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC17.08■□□□□ 0.33
HOXC12P31275 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
HOXC12P31275 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
HOXC12P31275 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
HOXC12P31275 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
HOXC12P31275 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
HOXC12P31275 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC17.08■□□□□ 0.32
HOXC12P31275 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
HOXC12P31275 KRT8P8-201ENST00000434750 1448 ntBASIC17.08■□□□□ 0.32
HOXC12P31275 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
HOXC12P31275 AC005521.1-201ENST00000393351 872 ntBASIC17.08■□□□□ 0.32
HOXC12P31275 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
HOXC12P31275 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC17.08■□□□□ 0.32
HOXC12P31275 NIFKP9-201ENST00000419265 221 ntBASIC17.08■□□□□ 0.32
HOXC12P31275 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC17.08■□□□□ 0.32
HOXC12P31275 KSR1P1-201ENST00000446298 240 ntBASIC17.08■□□□□ 0.32
HOXC12P31275 RNF146-204ENST00000476956 884 ntTSL 2 BASIC17.08■□□□□ 0.32
HOXC12P31275 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC17.08■□□□□ 0.32
HOXC12P31275 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC17.08■□□□□ 0.32
HOXC12P31275 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
HOXC12P31275 HTR7P1-202ENST00000624664 4411 ntBASIC17.08■□□□□ 0.32
HOXC12P31275 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
HOXC12P31275 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC17.08■□□□□ 0.32
HOXC12P31275 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
HOXC12P31275 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC17.08■□□□□ 0.32
HOXC12P31275 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
HOXC12P31275 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
HOXC12P31275 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
HOXC12P31275 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
HOXC12P31275 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
HOXC12P31275 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
HOXC12P31275 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC17.07■□□□□ 0.32
HOXC12P31275 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC17.07■□□□□ 0.32
HOXC12P31275 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
HOXC12P31275 KRT16P1-201ENST00000399124 1418 ntBASIC17.07■□□□□ 0.32
HOXC12P31275 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
HOXC12P31275 SRI-203ENST00000419179 1307 ntTSL 2 BASIC17.07■□□□□ 0.32
HOXC12P31275 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
HOXC12P31275 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC17.07■□□□□ 0.32
HOXC12P31275 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
HOXC12P31275 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC17.07■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 37.7 ms