Protein–RNA interactions for Protein: P26368

U2AF2, Splicing factor U2AF 65 kDa subunit, humanhuman

Known RBP eCLIP

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF2P26368 TBCK-202ENST00000361687 3312 ntTSL 1 (best) BASIC11.21□□□□□ -0.626e-8■■■■□ 22.6
U2AF2P26368 TBCK-203ENST00000394706 3349 ntTSL 1 (best) BASIC10.71□□□□□ -0.696e-8■■■■□ 22.6
U2AF2P26368 TBCK-220ENST00000515705 592 ntTSL 510.61□□□□□ -0.711e-8■■■■□ 22.6
U2AF2P26368 AC002480.1-201ENST00000442252 1282 ntTSL 1 (best) BASIC10.25□□□□□ -0.772e-7■■■■□ 22.6
U2AF2P26368 TBCK-201ENST00000273980 8101 ntAPPRIS P1 TSL 5 BASIC10.17□□□□□ -0.786e-8■■■■□ 22.6
U2AF2P26368 TBCK-206ENST00000467183 3566 ntTSL 1 (best)10.11□□□□□ -0.796e-8■■■■□ 22.6
U2AF2P26368 FANCD2-201ENST00000287647 5219 ntAPPRIS P3 TSL 1 (best) BASIC7.67□□□□□ -1.186e-8■■■■□ 22.6
U2AF2P26368 CHCHD3-206ENST00000496427 721 ntTSL 57.55□□□□□ -1.26e-8■■■■□ 22.6
U2AF2P26368 TBCK-205ENST00000432496 3362 ntAPPRIS P1 TSL 2 BASIC6.44□□□□□ -1.386e-8■■■■□ 22.6
U2AF2P26368 FANCD2-203ENST00000419585 5185 ntAPPRIS ALT2 TSL 1 (best) BASIC6.39□□□□□ -1.396e-8■■■■□ 22.6
U2AF2P26368 TBCK-219ENST00000514689 703 ntTSL 36.08□□□□□ -1.441e-8■■■■□ 22.6
U2AF2P26368 TBCK-212ENST00000506615 593 ntTSL 36.02□□□□□ -1.456e-8■■■■□ 22.6
U2AF2P26368 FANCD2-202ENST00000383807 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC5.85□□□□□ -1.476e-8■■■■□ 22.6
U2AF2P26368 FANCD2-212ENST00000483276 505 ntTSL 44.86□□□□□ -1.636e-8■■■■□ 22.6
U2AF2P26368 TBCK-217ENST00000510927 2826 ntTSL 24.11□□□□□ -1.756e-8■■■■□ 22.6
U2AF2P26368 STEAP1B-204ENST00000439708 797 ntTSL 33.51□□□□□ -1.852e-7■■■■□ 22.6
U2AF2P26368 TXNRD1-215ENST00000526950 1847 ntTSL 5 BASIC12.48□□□□□ -0.411e-15■■■■□ 22.6
U2AF2P26368 TMEM165-206ENST00000508561 756 ntTSL 514.84□□□□□ -0.031e-7■■■■□ 22.6
U2AF2P26368 TMEM165-212ENST00000608091 1567 ntTSL 312.05□□□□□ -0.481e-7■■■■□ 22.6
U2AF2P26368 TMEM165-210ENST00000514904 1522 ntTSL 211.86□□□□□ -0.511e-7■■■■□ 22.6
U2AF2P26368 TMEM165-207ENST00000509575 570 ntTSL 21.57□□□□□ -2.161e-7■■■■□ 22.6
U2AF2P26368 ZNF26-201ENST00000328654 17601 ntAPPRIS P3 TSL 1 (best) BASIC6.1□□□□□ -1.432e-6■■■■□ 22.6
U2AF2P26368 SPC25-204ENST00000479309 510 ntTSL 51.18□□□□□ -2.224e-7■■■■□ 22.6
U2AF2P26368 SLC38A2-202ENST00000546520 601 ntTSL 25.56□□□□□ -1.522e-27■■■■□ 22.6
U2AF2P26368 TPM1-217ENST00000559108 437 ntTSL 212.42□□□□□ -0.421e-7■■■■□ 22.6
U2AF2P26368 TTC6-202ENST00000382320 1972 ntTSL 2 BASIC7.62□□□□□ -1.194e-11■■■■□ 22.6
U2AF2P26368 TTC6-204ENST00000478811 2193 ntTSL 24.81□□□□□ -1.644e-11■■■■□ 22.6
U2AF2P26368 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC2.65□□□□□ -1.994e-11■■■■□ 22.6
U2AF2P26368 SHPRH-210ENST00000523276 2030 ntTSL 27.72□□□□□ -1.172e-8■■■■□ 22.6
U2AF2P26368 SPOP-204ENST00000502385 574 ntTSL 416.79■□□□□ 0.284e-6■■■■□ 22.6
U2AF2P26368 SPOP-213ENST00000508805 428 ntTSL 314.74□□□□□ -0.054e-6■■■■□ 22.6
U2AF2P26368 SPOP-203ENST00000451526 450 ntTSL 214.66□□□□□ -0.064e-6■■■■□ 22.6
U2AF2P26368 LNPK-203ENST00000409660 2028 ntTSL 1 (best)29.74■■■□□ 2.356e-7■■■■□ 22.6
U2AF2P26368 LNPK-201ENST00000272748 7610 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.086e-7■■■■□ 22.6
U2AF2P26368 LNPK-212ENST00000544803 7647 ntTSL 1 (best) BASIC7.68□□□□□ -1.186e-7■■■■□ 22.6
U2AF2P26368 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC26.27■■□□□ 1.87e-8■■■■□ 22.6
U2AF2P26368 QKI-204ENST00000361758 6085 ntTSL 525.45■■□□□ 1.667e-8■■■■□ 22.6
U2AF2P26368 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC21.45■■□□□ 1.027e-8■■■■□ 22.6
U2AF2P26368 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.867e-8■■■■□ 22.6
U2AF2P26368 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC20.08■□□□□ 0.87e-8■■■■□ 22.6
U2AF2P26368 QKI-210ENST00000537883 1106 ntTSL 39.76□□□□□ -0.857e-8■■■■□ 22.6
U2AF2P26368 QKI-217ENST00000545607 846 ntTSL 55.45□□□□□ -1.547e-8■■■■□ 22.6
U2AF2P26368 QKI-202ENST00000361195 1063 ntTSL 1 (best) BASIC3.93□□□□□ -1.787e-8■■■■□ 22.6
U2AF2P26368 QKI-213ENST00000544361 613 ntTSL 53.81□□□□□ -1.87e-8■■■■□ 22.6
U2AF2P26368 EML4-207ENST00000480320 1932 ntTSL 23.67□□□□□ -1.825e-9■■■■□ 22.6
U2AF2P26368 U2SURP-215ENST00000493782 588 ntTSL 1 (best)13.76□□□□□ -0.213e-9■■■■□ 22.6
U2AF2P26368 U2SURP-217ENST00000600150 725 ntTSL 54.21□□□□□ -1.743e-9■■■■□ 22.6
U2AF2P26368 U2SURP-204ENST00000465175 571 ntTSL 44.21□□□□□ -1.743e-9■■■■□ 22.6
U2AF2P26368 FRRS1-201ENST00000287474 2678 ntAPPRIS P1 TSL 2 BASIC10.14□□□□□ -0.795e-8■■■■□ 22.6
U2AF2P26368 GLRX3-203ENST00000481034 1921 ntTSL 1 (best)24.56■■□□□ 1.522e-6■■■■□ 22.6
U2AF2P26368 GLRX3-202ENST00000368644 3827 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.132e-6■■■■□ 22.6
U2AF2P26368 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.852e-7■■■■□ 22.6
U2AF2P26368 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.642e-7■■■■□ 22.6
U2AF2P26368 DKC1-206ENST00000452771 708 ntTSL 510.56□□□□□ -0.722e-7■■■■□ 22.6
U2AF2P26368 DKC1-205ENST00000437719 686 ntTSL 39.82□□□□□ -0.842e-7■■■■□ 22.6
U2AF2P26368 DKC1-203ENST00000413910 851 ntTSL 58.93□□□□□ -0.982e-7■■■■□ 22.6
U2AF2P26368 PAPSS1-201ENST00000265174 2731 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.181e-6■■■■□ 22.6
U2AF2P26368 PAPSS1-205ENST00000511304 927 ntTSL 39.57□□□□□ -0.881e-6■■■■□ 22.6
U2AF2P26368 BRD2-208ENST00000464592 1590 ntTSL 512.09□□□□□ -0.474e-23■■■■□ 22.6
U2AF2P26368 SUPT20H-217ENST00000484078 1876 ntTSL 1 (best)6.12□□□□□ -1.435e-7■■■■□ 22.6
U2AF2P26368 HERC1-205ENST00000559886 2462 ntTSL 1 (best)14.04□□□□□ -0.167e-7■■■■□ 22.5
U2AF2P26368 MATR3-208ENST00000504045 1530 ntTSL 518.9■□□□□ 0.622e-11■■■■□ 22.5
U2AF2P26368 MATR3-222ENST00000513678 444 ntTSL 218.72■□□□□ 0.592e-11■■■■□ 22.5
U2AF2P26368 MATR3-220ENST00000512876 575 ntTSL 318.61■□□□□ 0.572e-11■■■■□ 22.5
U2AF2P26368 MATR3-225ENST00000514528 532 ntTSL 418.42■□□□□ 0.542e-11■■■■□ 22.5
U2AF2P26368 MATR3-209ENST00000504311 423 ntTSL 32.53□□□□□ -22e-11■■■■□ 22.5
U2AF2P26368 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.799e-32■■■■□ 22.5
U2AF2P26368 WNK2-214ENST00000474009 561 ntTSL 319.39■□□□□ 0.699e-32■■■■□ 22.5
U2AF2P26368 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.689e-32■■■■□ 22.5
U2AF2P26368 WNK2-208ENST00000453718 1937 ntTSL 519.04■□□□□ 0.649e-32■■■■□ 22.5
U2AF2P26368 WNK2-205ENST00000432730 7792 ntAPPRIS ALT2 TSL 1 (best)18.23■□□□□ 0.519e-32■■■■□ 22.5
U2AF2P26368 WNK2-203ENST00000411624 6679 ntTSL 1 (best)17.37■□□□□ 0.379e-32■■■■□ 22.5
U2AF2P26368 WNK2-207ENST00000448251 3224 ntTSL 215.6■□□□□ 0.099e-32■■■■□ 22.5
U2AF2P26368 TMEM39A-201ENST00000319172 4369 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.757e-8■■■■□ 22.5
U2AF2P26368 TMEM39A-202ENST00000438581 4393 ntTSL 1 (best)8.9□□□□□ -0.997e-8■■■■□ 22.5
U2AF2P26368 WNK2-216ENST00000479696 532 ntTSL 38.56□□□□□ -1.049e-32■■■■□ 22.5
U2AF2P26368 AC007388.1-204ENST00000449569 2517 ntTSL 2 BASIC17.03■□□□□ 0.328e-7■■■■□ 22.5
U2AF2P26368 AC007388.1-207ENST00000446698 593 ntTSL 514.24□□□□□ -0.138e-7■■■■□ 22.5
U2AF2P26368 AC007388.1-201ENST00000426083 1438 ntTSL 1 (best) BASIC9.03□□□□□ -0.968e-7■■■■□ 22.5
U2AF2P26368 PCK2-214ENST00000560736 897 ntTSL 324.85■■□□□ 1.573e-25■■■■□ 22.5
U2AF2P26368 PCK2-211ENST00000559837 756 ntTSL 319.12■□□□□ 0.653e-25■■■■□ 22.5
U2AF2P26368 PCK2-212ENST00000560106 782 ntTSL 514.01□□□□□ -0.173e-25■■■■□ 22.5
U2AF2P26368 MAP3K4-202ENST00000366919 5397 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.42e-7■■■■□ 22.5
U2AF2P26368 MAP3K4-201ENST00000348824 5295 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.212e-7■■■■□ 22.5
U2AF2P26368 MAP3K4-213ENST00000542952 629 ntTSL 416.15■□□□□ 0.189e-8■■■■□ 22.5
U2AF2P26368 MAP3K4-204ENST00000392142 5490 ntAPPRIS P4 TSL 1 (best) BASIC16.12■□□□□ 0.172e-7■■■■□ 22.5
U2AF2P26368 MAP3K4-215ENST00000544041 5444 ntTSL 1 (best)15.72■□□□□ 0.112e-7■■■■□ 22.5
U2AF2P26368 MAP3K4-207ENST00000490904 5451 ntTSL 1 (best)15.66■□□□□ 0.12e-7■■■■□ 22.5
U2AF2P26368 MAP3K4-203ENST00000366920 5445 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.032e-7■■■■□ 22.5
U2AF2P26368 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC22.13■■□□□ 1.133e-6■■■■□ 22.5
U2AF2P26368 OPA1-218ENST00000495476 488 ntTSL 35.77□□□□□ -1.499e-16■■■■□ 22.5
U2AF2P26368 SRRM2-215ENST00000573498 994 ntTSL 36.52□□□□□ -1.372e-18■■■■□ 22.5
U2AF2P26368 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC21.21■□□□□ 0.994e-7■■■■□ 22.5
U2AF2P26368 EHMT1-201ENST00000371394 2679 ntTSL 216.83■□□□□ 0.294e-7■■■■□ 22.5
U2AF2P26368 EHMT1-251ENST00000638071 1710 ntTSL 516.14■□□□□ 0.174e-7■■■■□ 22.5
U2AF2P26368 EHMT1-228ENST00000636027 3114 ntTSL 514.56□□□□□ -0.084e-7■■■■□ 22.5
U2AF2P26368 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC22.18■■□□□ 1.144e-7■■■■□ 22.5
U2AF2P26368 MARS-233ENST00000628866 2583 ntTSL 5 BASIC17.84■□□□□ 0.452e-7■■■■□ 22.5
U2AF2P26368 MARS-201ENST00000262027 2905 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.412e-7■■■■□ 22.5
U2AF2P26368 MARS-204ENST00000545888 2979 ntTSL 517.54■□□□□ 0.42e-7■■■■□ 22.5
Retrieved 100 of 36,523 protein–RNA pairs in 226.3 ms