RNA–Protein interactions for RNA: ENST00000479309.6

SPC25-204, Transcript of SPC25, NDC80 kinetochore complex component, humanhuman

TSL 5

Gene SPC25, Length 510 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPC25-204ENST00000479309 AEBP2Q6ZN18 517 aaPredicted RBP22.25■■□□□ 1.15
SPC25-204ENST00000479309 CHIC1Q5VXU3 224 aa21.38■■□□□ 1.01
SPC25-204ENST00000479309 SENP3Q9H4L4 574 aaPredicted RBP18.96■□□□□ 0.63
SPC25-204ENST00000479309 PHF23Q9BUL5 403 aaPredicted RBP18.75■□□□□ 0.59
SPC25-204ENST00000479309 POTEDQ86YR6 584 aa18.22■□□□□ 0.51
SPC25-204ENST00000479309 FOXD1Q16676 465 aa17.9■□□□□ 0.46
SPC25-204ENST00000479309 PLPPR3Q6T4P5 718 aa17.23■□□□□ 0.35
SPC25-204ENST00000479309 MSH5O43196 834 aa16.97■□□□□ 0.31
SPC25-204ENST00000479309 PPP6R1Q9UPN7 881 aa16.62■□□□□ 0.25
SPC25-204ENST00000479309 ADRA2BP18089 450 aa16.55■□□□□ 0.24
SPC25-204ENST00000479309 PIAS4Q8N2W9 510 aaPredicted RBP16.41■□□□□ 0.22
SPC25-204ENST00000479309 SCAF1Q9H7N4 1312 aaKnown RBP15.22■□□□□ 0.03
SPC25-204ENST00000479309 CACNB1Q02641 598 aaPredicted RBP15.15■□□□□ 0.02
SPC25-204ENST00000479309 PPP4R3CPQ6ZMV5 832 aa15.12■□□□□ 0.01
SPC25-204ENST00000479309 MAPK8IP2Q13387 824 aaPredicted RBP15.1■□□□□ 0.01
SPC25-204ENST00000479309 DMRT2Q9Y5R5 561 aa15.02■□□□□ -0
SPC25-204ENST00000479309 CNKSR2Q8WXI2 1034 aa14.79□□□□□ -0.04
SPC25-204ENST00000479309 NCBP3Q53F19 620 aaKnown RBP14.65□□□□□ -0.06
SPC25-204ENST00000479309 HOXD11P31277 338 aaPredicted RBP14.64□□□□□ -0.07
SPC25-204ENST00000479309 RNF216Q9NWF9 866 aaPredicted RBP14.59□□□□□ -0.07
SPC25-204ENST00000479309 RNF39Q9H2S5 420 aa14.47□□□□□ -0.09
SPC25-204ENST00000479309 NPM3O75607 178 aaKnown RBP14.42□□□□□ -0.1
SPC25-204ENST00000479309 KCNA4P22459 653 aa14.39□□□□□ -0.11
SPC25-204ENST00000479309 DCAF8L1A6NGE4 600 aa14.31□□□□□ -0.12
SPC25-204ENST00000479309 DNAJC5BQ9UF47 199 aa14.23□□□□□ -0.13
SPC25-204ENST00000479309 C1QBPQ07021 282 aaKnown RBP14.16□□□□□ -0.14
SPC25-204ENST00000479309 POTEHQ6S545 545 aa14.06□□□□□ -0.16
SPC25-204ENST00000479309 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.83□□□□□ -0.22e-6■■□□□ 14.4
SPC25-204ENST00000479309 SLC4A2P04920 1241 aa13.7□□□□□ -0.22
SPC25-204ENST00000479309 SLC4A1APQ9BWU0 796 aaKnown RBP13.65□□□□□ -0.22
SPC25-204ENST00000479309 U3KPZ7 1027 aaPredicted RBP13.62□□□□□ -0.23
SPC25-204ENST00000479309 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.39□□□□□ -0.27
SPC25-204ENST00000479309 HNRNPUL2Q1KMD3 747 aaKnown RBP13.39□□□□□ -0.27
SPC25-204ENST00000479309 FOXD4L1Q9NU39 408 aa13.37□□□□□ -0.27
SPC25-204ENST00000479309 MYCNP04198 464 aaPredicted RBP13.34□□□□□ -0.27
SPC25-204ENST00000479309 APLP2Q06481 763 aa13.32□□□□□ -0.28
SPC25-204ENST00000479309 SAMD1Q6SPF0 538 aaPredicted RBP13.31□□□□□ -0.28
SPC25-204ENST00000479309 SPINK5Q9NQ38 1064 aaPredicted RBP13.29□□□□□ -0.28
SPC25-204ENST00000479309 DSG3P32926 999 aa13.26□□□□□ -0.29
SPC25-204ENST00000479309 ZBTB22O15209 634 aa13.25□□□□□ -0.29
SPC25-204ENST00000479309 CAPN15O75808 1086 aa13.23□□□□□ -0.29
SPC25-204ENST00000479309 ZNF219Q9P2Y4 722 aaPredicted RBP13.16□□□□□ -0.3
SPC25-204ENST00000479309 TRHP20396 242 aaPredicted RBP13.08□□□□□ -0.32
SPC25-204ENST00000479309 ATXN8OSP0DMR3 200 aa13□□□□□ -0.33
SPC25-204ENST00000479309 ATF5Q9Y2D1 282 aaPredicted RBP12.97□□□□□ -0.33
SPC25-204ENST00000479309 CSRNP3Q8WYN3 585 aa12.94□□□□□ -0.34
SPC25-204ENST00000479309 ABCB7O75027 752 aa12.92□□□□□ -0.34
SPC25-204ENST00000479309 POLA2Q14181 598 aa12.85□□□□□ -0.35
SPC25-204ENST00000479309 EHMT2Q96KQ7 1210 aa12.82□□□□□ -0.36
SPC25-204ENST00000479309 SP7Q8TDD2 431 aaPredicted RBP12.74□□□□□ -0.37
SPC25-204ENST00000479309 CHRDL2Q6WN34 429 aa12.71□□□□□ -0.37
SPC25-204ENST00000479309 ZBTB12Q9Y330 459 aaPredicted RBP12.67□□□□□ -0.38
SPC25-204ENST00000479309 RBM42Q9BTD8 480 aaKnown RBP12.56□□□□□ -0.4
SPC25-204ENST00000479309 FBLN2P98095 1184 aa12.45□□□□□ -0.42
SPC25-204ENST00000479309 MKRN4PQ13434 485 aaPredicted RBP12.42□□□□□ -0.42
SPC25-204ENST00000479309 OSCARQ8IYS5 282 aa12.4□□□□□ -0.42
SPC25-204ENST00000479309 AKT1S1Q96B36 256 aa12.35□□□□□ -0.43
SPC25-204ENST00000479309 SPDYE2BA6NHP3 402 aa12.31□□□□□ -0.44
SPC25-204ENST00000479309 SPDYE6P0CI01 402 aa12.31□□□□□ -0.44
SPC25-204ENST00000479309 SPDYE2Q495Y8 402 aa12.31□□□□□ -0.44
SPC25-204ENST00000479309 PIP4P2Q8N4L2 257 aa12.25□□□□□ -0.45
SPC25-204ENST00000479309 HAX1O00165 279 aa12.23□□□□□ -0.45
SPC25-204ENST00000479309 REM2Q8IYK8 340 aaPredicted RBP12.19□□□□□ -0.46
SPC25-204ENST00000479309 SSUH2Q9Y2M2 353 aa12.19□□□□□ -0.46
SPC25-204ENST00000479309 ZNF692Q9BU19 519 aaPredicted RBP12.16□□□□□ -0.46
SPC25-204ENST00000479309 EVX2Q03828 476 aa12.15□□□□□ -0.46
SPC25-204ENST00000479309 PITPNM1O00562 1244 aa12.04□□□□□ -0.48
SPC25-204ENST00000479309 FXR2P51116 673 aaKnown RBP eCLIP12.04□□□□□ -0.48
SPC25-204ENST00000479309 SPDYE1Q8NFV5 336 aaPredicted RBP11.99□□□□□ -0.49
SPC25-204ENST00000479309 PABPN1Q86U42 306 aaKnown RBP eCLIP11.98□□□□□ -0.49
SPC25-204ENST00000479309 SPDYE4A6NLX3 237 aa11.97□□□□□ -0.49
SPC25-204ENST00000479309 LHX8Q68G74 356 aa11.95□□□□□ -0.5
SPC25-204ENST00000479309 PLSCR2Q9NRY7 297 aa11.91□□□□□ -0.5
SPC25-204ENST00000479309 CLEC11AQ9Y240 323 aa11.87□□□□□ -0.51
SPC25-204ENST00000479309 PROM2Q8N271 834 aa11.84□□□□□ -0.51
SPC25-204ENST00000479309 STAG3Q9UJ98 1225 aa11.79□□□□□ -0.52
SPC25-204ENST00000479309 PRR29P0C7W0 189 aa11.77□□□□□ -0.53
SPC25-204ENST00000479309 GABBR2O75899 941 aa11.75□□□□□ -0.53
SPC25-204ENST00000479309 PRKAR2AP13861 404 aaKnown RBP11.72□□□□□ -0.53
SPC25-204ENST00000479309 C19orf67A6NJJ6 358 aa11.69□□□□□ -0.54
SPC25-204ENST00000479309 FKBP8Q14318 412 aa11.66□□□□□ -0.54
SPC25-204ENST00000479309 CHADLQ6NUI6 762 aa11.62□□□□□ -0.55
SPC25-204ENST00000479309 CREBZFQ9NS37 354 aa11.58□□□□□ -0.56
SPC25-204ENST00000479309 POTEIP0CG38 1075 aa11.56□□□□□ -0.56
SPC25-204ENST00000479309 FARP1Q9Y4F1 1045 aaPredicted RBP11.55□□□□□ -0.56
SPC25-204ENST00000479309 MNX1P50219 401 aaPredicted RBP11.46□□□□□ -0.57
SPC25-204ENST00000479309 FBXO3Q9UK99 471 aa11.4□□□□□ -0.58
SPC25-204ENST00000479309 NPM1P06748 294 aaKnown RBP eCLIP11.38□□□□□ -0.59
SPC25-204ENST00000479309 CD44P16070 742 aaKnown RBP11.36□□□□□ -0.59
SPC25-204ENST00000479309 MIER1Q8N108 512 aa11.36□□□□□ -0.59
SPC25-204ENST00000479309 PLEKHG5O94827 1062 aa11.34□□□□□ -0.59
SPC25-204ENST00000479309 CLCN6P51797 869 aa11.3□□□□□ -0.6
SPC25-204ENST00000479309 POTEMA6NI47 508 aa11.29□□□□□ -0.6
SPC25-204ENST00000479309 PLCD3Q8N3E9 789 aa11.29□□□□□ -0.6
SPC25-204ENST00000479309 ZNF579Q8NAF0 562 aaKnown RBP11.27□□□□□ -0.61
SPC25-204ENST00000479309 ZBTB47Q9UFB7 747 aaPredicted RBP11.27□□□□□ -0.61
SPC25-204ENST00000479309 OTUD5Q96G74 571 aa11.26□□□□□ -0.61
SPC25-204ENST00000479309 ZRANB1Q9UGI0 708 aa11.25□□□□□ -0.61
SPC25-204ENST00000479309 PAK3O75914 559 aaPredicted RBP11.23□□□□□ -0.61
SPC25-204ENST00000479309 VASPP50552 380 aaPredicted RBP11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms