Protein–RNA interactions for Protein: P07339

CTSD, Cathepsin D, humanhuman

Predicted RBP Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSDP07339 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
CTSDP07339 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
CTSDP07339 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC16■□□□□ 0.15
CTSDP07339 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC16■□□□□ 0.15
CTSDP07339 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
CTSDP07339 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC16■□□□□ 0.15
CTSDP07339 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC16■□□□□ 0.15
CTSDP07339 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC16■□□□□ 0.15
CTSDP07339 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC16■□□□□ 0.15
CTSDP07339 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC16■□□□□ 0.15
CTSDP07339 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC16■□□□□ 0.15
CTSDP07339 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC16■□□□□ 0.15
CTSDP07339 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CTSDP07339 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CTSDP07339 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CTSDP07339 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC16■□□□□ 0.15
CTSDP07339 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC16■□□□□ 0.15
CTSDP07339 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CTSDP07339 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CTSDP07339 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CTSDP07339 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC16■□□□□ 0.15
CTSDP07339 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC16■□□□□ 0.15
CTSDP07339 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CTSDP07339 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
CTSDP07339 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC15.99■□□□□ 0.15
CTSDP07339 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
CTSDP07339 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC15.99■□□□□ 0.15
CTSDP07339 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
CTSDP07339 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC15.99■□□□□ 0.15
CTSDP07339 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC15.99■□□□□ 0.15
CTSDP07339 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
CTSDP07339 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CTSDP07339 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
CTSDP07339 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
CTSDP07339 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CTSDP07339 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CTSDP07339 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC15.99■□□□□ 0.15
CTSDP07339 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC15.99■□□□□ 0.15
CTSDP07339 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
CTSDP07339 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC15.99■□□□□ 0.15
CTSDP07339 RARRES2P6-201ENST00000567333 442 ntBASIC15.99■□□□□ 0.15
CTSDP07339 MIR6821-201ENST00000617625 74 ntBASIC15.99■□□□□ 0.15
CTSDP07339 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CTSDP07339 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC15.99■□□□□ 0.15
CTSDP07339 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC15.99■□□□□ 0.15
CTSDP07339 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
CTSDP07339 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC15.99■□□□□ 0.15
CTSDP07339 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
CTSDP07339 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
CTSDP07339 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC15.99■□□□□ 0.15
CTSDP07339 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
CTSDP07339 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC15.98■□□□□ 0.15
CTSDP07339 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CTSDP07339 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC15.98■□□□□ 0.15
CTSDP07339 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC15.98■□□□□ 0.15
CTSDP07339 BCL2-203ENST00000589955 5011 ntBASIC15.98■□□□□ 0.15
CTSDP07339 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC15.98■□□□□ 0.15
CTSDP07339 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CTSDP07339 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
CTSDP07339 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
CTSDP07339 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC15.98■□□□□ 0.15
CTSDP07339 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC15.98■□□□□ 0.15
CTSDP07339 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC15.98■□□□□ 0.15
CTSDP07339 CALM3-202ENST00000391918 702 ntTSL 2 BASIC15.98■□□□□ 0.15
CTSDP07339 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC15.98■□□□□ 0.15
CTSDP07339 TFP1-202ENST00000475455 1573 ntBASIC15.98■□□□□ 0.15
CTSDP07339 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC15.98■□□□□ 0.15
CTSDP07339 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
CTSDP07339 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
CTSDP07339 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC15.98■□□□□ 0.15
CTSDP07339 PLD4-205ENST00000553861 667 ntTSL 2 BASIC15.98■□□□□ 0.15
CTSDP07339 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC15.98■□□□□ 0.15
CTSDP07339 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
CTSDP07339 AC087623.3-201ENST00000607047 1098 ntBASIC15.98■□□□□ 0.15
CTSDP07339 AL589743.5-201ENST00000616611 1050 ntBASIC15.98■□□□□ 0.15
CTSDP07339 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
CTSDP07339 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
CTSDP07339 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC15.98■□□□□ 0.15
CTSDP07339 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CTSDP07339 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC15.98■□□□□ 0.15
CTSDP07339 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CTSDP07339 PCDHB18P-201ENST00000524813 2368 ntBASIC15.98■□□□□ 0.15
CTSDP07339 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
CTSDP07339 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
CTSDP07339 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC15.97■□□□□ 0.15
CTSDP07339 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
CTSDP07339 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
CTSDP07339 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC15.97■□□□□ 0.15
CTSDP07339 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
CTSDP07339 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC15.97■□□□□ 0.15
CTSDP07339 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
CTSDP07339 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC15.97■□□□□ 0.15
CTSDP07339 AL133373.2-201ENST00000623187 2828 ntBASIC15.97■□□□□ 0.15
CTSDP07339 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC15.97■□□□□ 0.15
CTSDP07339 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC15.97■□□□□ 0.15
CTSDP07339 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CTSDP07339 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC15.97■□□□□ 0.15
CTSDP07339 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CTSDP07339 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
CTSDP07339 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 22 ms