Protein–RNA interactions for Protein: O95170

CDRT1, CMT1A duplicated region transcript 1 protein, humanhuman

Predictions only

Length 752 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1O95170 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CDRT1O95170 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
CDRT1O95170 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CDRT1O95170 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC17.18■□□□□ 0.34
CDRT1O95170 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CDRT1O95170 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC17.18■□□□□ 0.34
CDRT1O95170 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC17.18■□□□□ 0.34
CDRT1O95170 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC17.18■□□□□ 0.34
CDRT1O95170 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC17.18■□□□□ 0.34
CDRT1O95170 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CDRT1O95170 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
CDRT1O95170 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC17.18■□□□□ 0.34
CDRT1O95170 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CDRT1O95170 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CDRT1O95170 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CDRT1O95170 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CDRT1O95170 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
CDRT1O95170 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CDRT1O95170 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CDRT1O95170 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CDRT1O95170 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC17.17■□□□□ 0.34
CDRT1O95170 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC17.17■□□□□ 0.34
CDRT1O95170 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CDRT1O95170 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CDRT1O95170 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
CDRT1O95170 FP475955.4-201ENST00000623131 1990 ntBASIC17.17■□□□□ 0.34
CDRT1O95170 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
CDRT1O95170 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CDRT1O95170 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CDRT1O95170 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CDRT1O95170 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC17.17■□□□□ 0.34
CDRT1O95170 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CDRT1O95170 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CDRT1O95170 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
CDRT1O95170 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CDRT1O95170 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
CDRT1O95170 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CDRT1O95170 AC097381.1-201ENST00000429019 1296 ntBASIC17.17■□□□□ 0.34
CDRT1O95170 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CDRT1O95170 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CDRT1O95170 LGR4-203ENST00000480977 492 ntTSL 2 BASIC17.17■□□□□ 0.34
CDRT1O95170 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC17.17■□□□□ 0.34
CDRT1O95170 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC17.17■□□□□ 0.34
CDRT1O95170 AC087633.2-202ENST00000565166 1439 ntBASIC17.17■□□□□ 0.34
CDRT1O95170 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC17.17■□□□□ 0.34
CDRT1O95170 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC17.17■□□□□ 0.34
CDRT1O95170 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CDRT1O95170 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC17.17■□□□□ 0.34
CDRT1O95170 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC17.17■□□□□ 0.34
CDRT1O95170 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
CDRT1O95170 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CDRT1O95170 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC17.17■□□□□ 0.34
CDRT1O95170 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
CDRT1O95170 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC17.17■□□□□ 0.34
CDRT1O95170 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CDRT1O95170 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CDRT1O95170 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CDRT1O95170 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CDRT1O95170 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CDRT1O95170 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CDRT1O95170 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC17.16■□□□□ 0.34
CDRT1O95170 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
CDRT1O95170 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC17.16■□□□□ 0.34
CDRT1O95170 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC17.16■□□□□ 0.34
CDRT1O95170 AC093525.10-201ENST00000625130 1569 ntBASIC17.16■□□□□ 0.34
CDRT1O95170 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CDRT1O95170 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CDRT1O95170 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CDRT1O95170 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CDRT1O95170 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CDRT1O95170 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC17.16■□□□□ 0.34
CDRT1O95170 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
CDRT1O95170 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
CDRT1O95170 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
CDRT1O95170 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CDRT1O95170 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CDRT1O95170 AL031963.3-201ENST00000606441 850 ntBASIC17.16■□□□□ 0.34
CDRT1O95170 TFG-210ENST00000620299 1289 ntTSL 5 BASIC17.16■□□□□ 0.34
CDRT1O95170 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
CDRT1O95170 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC17.16■□□□□ 0.34
CDRT1O95170 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC17.16■□□□□ 0.34
CDRT1O95170 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CDRT1O95170 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CDRT1O95170 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CDRT1O95170 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
CDRT1O95170 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC17.16■□□□□ 0.34
CDRT1O95170 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CDRT1O95170 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CDRT1O95170 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CDRT1O95170 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
CDRT1O95170 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC17.16■□□□□ 0.34
CDRT1O95170 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
CDRT1O95170 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CDRT1O95170 USP39-202ENST00000409025 1946 ntTSL 5 BASIC17.15■□□□□ 0.34
CDRT1O95170 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CDRT1O95170 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC17.15■□□□□ 0.34
CDRT1O95170 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC17.15■□□□□ 0.34
CDRT1O95170 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC17.15■□□□□ 0.34
CDRT1O95170 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CDRT1O95170 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC17.15■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms