Protein–RNA interactions for Protein: O75940

SMNDC1, Survival of motor neuron-related-splicing factor 30, humanhuman

Known RBP eCLIP

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1O75940 STK25-226ENST00000479442 511 ntTSL 212.88□□□□□ -0.353e-12■■□□□ 11.8
SMNDC1O75940 LAMB1-204ENST00000393561 5766 ntTSL 5 BASIC11.92□□□□□ -0.53e-12■■□□□ 11.8
SMNDC1O75940 STK25-220ENST00000461760 644 ntTSL 310.71□□□□□ -0.693e-12■■□□□ 11.8
SMNDC1O75940 STK25-233ENST00000496159 463 ntTSL 210.59□□□□□ -0.713e-12■■□□□ 11.8
SMNDC1O75940 STK25-206ENST00000413760 801 ntTSL 38.65□□□□□ -1.023e-12■■□□□ 11.8
SMNDC1O75940 STK25-212ENST00000435225 570 ntTSL 47.55□□□□□ -1.23e-12■■□□□ 11.8
SMNDC1O75940 IRAK1-210ENST00000455690 784 ntTSL 317.43■□□□□ 0.383e-7■■□□□ 11.8
SMNDC1O75940 IRAK1-212ENST00000467236 434 ntTSL 215.24■□□□□ 0.033e-7■■□□□ 11.8
SMNDC1O75940 IRAK1-206ENST00000437278 862 ntTSL 512.67□□□□□ -0.383e-7■■□□□ 11.8
SMNDC1O75940 IRAK1-207ENST00000443220 1175 ntTSL 212.66□□□□□ -0.383e-7■■□□□ 11.8
SMNDC1O75940 IRAK1-213ENST00000477274 705 ntTSL 511.38□□□□□ -0.593e-7■■□□□ 11.8
SMNDC1O75940 NDOR1-205ENST00000612145 564 ntTSL 421.72■■□□□ 1.077e-8■■□□□ 11.7
SMNDC1O75940 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.887e-8■■□□□ 11.7
SMNDC1O75940 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC20.08■□□□□ 0.817e-8■■□□□ 11.7
SMNDC1O75940 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC19.79■□□□□ 0.767e-8■■□□□ 11.7
SMNDC1O75940 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC18.9■□□□□ 0.627e-8■■□□□ 11.7
SMNDC1O75940 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC16.76■□□□□ 0.277e-8■■□□□ 11.7
SMNDC1O75940 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC16.69■□□□□ 0.267e-8■■□□□ 11.7
SMNDC1O75940 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC15.28■□□□□ 0.047e-8■■□□□ 11.7
SMNDC1O75940 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 07e-8■■□□□ 11.7
SMNDC1O75940 NDOR1-206ENST00000613750 1151 ntTSL 314.55□□□□□ -0.087e-8■■□□□ 11.7
SMNDC1O75940 C22orf39-202ENST00000399562 3350 ntTSL 1 (best) BASIC13.45□□□□□ -0.267e-8■■□□□ 11.7
SMNDC1O75940 HIRA-203ENST00000452818 453 ntTSL 510.07□□□□□ -0.87e-8■■□□□ 11.7
SMNDC1O75940 GUK1-233ENST00000491613 959 ntTSL 312.15□□□□□ -0.462e-7■■□□□ 11.7
SMNDC1O75940 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.841e-8■■□□□ 11.7
SMNDC1O75940 PARP2-204ENST00000527915 1980 ntTSL 2 BASIC8.06□□□□□ -1.121e-8■■□□□ 11.7
SMNDC1O75940 PARP2-201ENST00000250416 1886 ntAPPRIS P3 TSL 1 (best) BASIC7.26□□□□□ -1.251e-8■■□□□ 11.7
SMNDC1O75940 PARP2-210ENST00000539930 635 ntTSL 36.34□□□□□ -1.391e-8■■□□□ 11.7
SMNDC1O75940 EIF4G2-211ENST00000527526 555 ntTSL 411.32□□□□□ -0.64e-11■■□□□ 11.7
SMNDC1O75940 EIF4G2-227ENST00000533485 806 ntTSL 210.53□□□□□ -0.724e-11■■□□□ 11.7
SMNDC1O75940 GLUL-210ENST00000484996 1369 ntTSL 318.52■□□□□ 0.552e-6■■□□□ 11.7
SMNDC1O75940 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.292e-6■■□□□ 11.7
SMNDC1O75940 GLUL-202ENST00000331872 4364 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.152e-6■■□□□ 11.7
SMNDC1O75940 GLUL-203ENST00000339526 3942 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.022e-6■■□□□ 11.7
SMNDC1O75940 GLUL-211ENST00000489818 683 ntTSL 39.12□□□□□ -0.952e-6■■□□□ 11.7
SMNDC1O75940 GLUL-207ENST00000463851 939 ntTSL 38.94□□□□□ -0.982e-6■■□□□ 11.7
SMNDC1O75940 GLUL-206ENST00000462444 793 ntTSL 28.11□□□□□ -1.112e-6■■□□□ 11.7
SMNDC1O75940 GLUL-209ENST00000480604 908 ntTSL 58.01□□□□□ -1.132e-6■■□□□ 11.7
SMNDC1O75940 AC073869.1-201ENST00000415574 2762 ntBASIC15.24■□□□□ 0.032e-9■■□□□ 11.7
SMNDC1O75940 AC073869.1-202ENST00000438378 3785 ntTSL 1 (best) BASIC10.9□□□□□ -0.662e-9■■□□□ 11.7
SMNDC1O75940 MADD-208ENST00000405573 1823 ntTSL 5 BASIC18.37■□□□□ 0.538e-8■■□□□ 11.6
SMNDC1O75940 MADD-203ENST00000349238 5873 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.248e-8■■□□□ 11.6
SMNDC1O75940 MADD-201ENST00000311027 5990 ntAPPRIS P4 TSL 1 (best) BASIC12.63□□□□□ -0.398e-8■■□□□ 11.6
SMNDC1O75940 MADD-204ENST00000395336 5942 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.48e-8■■□□□ 11.6
SMNDC1O75940 MADD-207ENST00000402799 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.458e-8■■□□□ 11.6
SMNDC1O75940 MADD-209ENST00000406482 5614 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.458e-8■■□□□ 11.6
SMNDC1O75940 MADD-210ENST00000407859 5744 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.528e-8■■□□□ 11.6
SMNDC1O75940 MADD-206ENST00000402192 5823 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.548e-8■■□□□ 11.6
SMNDC1O75940 MADD-202ENST00000342922 6005 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.568e-8■■□□□ 11.6
SMNDC1O75940 MADD-205ENST00000395344 4988 ntAPPRIS ALT2 TSL 2 BASIC10.21□□□□□ -0.788e-8■■□□□ 11.6
SMNDC1O75940 SLC25A39-215ENST00000592372 867 ntTSL 315.02■□□□□ -03e-8■■□□□ 11.6
SMNDC1O75940 HGS-214ENST00000576087 548 ntTSL 414.05□□□□□ -0.163e-8■■□□□ 11.6
SMNDC1O75940 DHX36-203ENST00000460695 2306 ntTSL 212.59□□□□□ -0.393e-8■■□□□ 11.6
SMNDC1O75940 METTL12-202ENST00000529868 2870 ntTSL 1 (best)15.45■□□□□ 0.061e-323■■□□□ 11.6
SMNDC1O75940 METTL12-203ENST00000532971 2037 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.291e-323■■□□□ 11.6
SMNDC1O75940 METTL12-201ENST00000398922 1368 ntTSL 412.19□□□□□ -0.461e-323■■□□□ 11.6
SMNDC1O75940 SNORA57-201ENST00000383870 149 ntBASIC11.69□□□□□ -0.541e-323■■□□□ 11.6
SMNDC1O75940 METTL12-204ENST00000594728 376 nt6.14□□□□□ -1.431e-323■■□□□ 11.6
SMNDC1O75940 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC14.01□□□□□ -0.173e-6■■□□□ 11.6
SMNDC1O75940 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC13.47□□□□□ -0.253e-6■■□□□ 11.6
SMNDC1O75940 OXA1L-202ENST00000358043 1750 ntTSL 2 BASIC13.25□□□□□ -0.293e-6■■□□□ 11.6
SMNDC1O75940 OXA1L-212ENST00000604262 1571 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.423e-6■■□□□ 11.6
SMNDC1O75940 OXA1L-209ENST00000495424 1679 ntTSL 210.92□□□□□ -0.663e-6■■□□□ 11.6
SMNDC1O75940 OXA1L-213ENST00000612549 2971 ntTSL 1 (best) BASIC9.76□□□□□ -0.853e-6■■□□□ 11.6
SMNDC1O75940 OXA1L-207ENST00000481218 1596 ntTSL 59.32□□□□□ -0.923e-6■■□□□ 11.6
SMNDC1O75940 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC19.41■□□□□ 0.73e-9■■□□□ 11.6
SMNDC1O75940 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.663e-9■■□□□ 11.6
SMNDC1O75940 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC17.99■□□□□ 0.473e-9■■□□□ 11.6
SMNDC1O75940 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC17■□□□□ 0.313e-9■■□□□ 11.6
SMNDC1O75940 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC16.55■□□□□ 0.243e-9■■□□□ 11.6
SMNDC1O75940 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC15.77■□□□□ 0.113e-9■■□□□ 11.6
SMNDC1O75940 SLC3A2-212ENST00000538682 1368 ntTSL 1 (best)13.45□□□□□ -0.263e-9■■□□□ 11.6
SMNDC1O75940 SLC3A2-215ENST00000539891 1300 ntTSL 1 (best)9.66□□□□□ -0.863e-9■■□□□ 11.6
SMNDC1O75940 H3F3B-203ENST00000586518 1701 nt28.32■■■□□ 2.124e-10■■□□□ 11.6
SMNDC1O75940 H3F3B-202ENST00000586270 468 ntTSL 222.18■■□□□ 1.144e-10■■□□□ 11.6
SMNDC1O75940 H3F3B-209ENST00000589949 842 ntTSL 216.22■□□□□ 0.194e-10■■□□□ 11.6
SMNDC1O75940 H3F3B-207ENST00000589417 575 ntTSL 215.65■□□□□ 0.14e-10■■□□□ 11.6
SMNDC1O75940 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC15.17■□□□□ 0.024e-10■■□□□ 11.6
SMNDC1O75940 H3F3B-201ENST00000254810 2705 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.124e-10■■□□□ 11.6
SMNDC1O75940 H3F3B-205ENST00000587171 586 ntTSL 211.84□□□□□ -0.514e-10■■□□□ 11.6
SMNDC1O75940 H3F3B-213ENST00000593254 894 ntTSL 511.84□□□□□ -0.514e-10■■□□□ 11.6
SMNDC1O75940 H3F3B-212ENST00000592643 795 ntTSL 3 BASIC10.52□□□□□ -0.734e-10■■□□□ 11.6
SMNDC1O75940 H3F3B-210ENST00000591890 783 ntTSL 3 BASIC9.65□□□□□ -0.864e-10■■□□□ 11.6
SMNDC1O75940 H3F3B-204ENST00000586607 551 ntAPPRIS P1 TSL 4 BASIC8.7□□□□□ -1.024e-10■■□□□ 11.6
SMNDC1O75940 OAZ1-208ENST00000592727 726 ntTSL 213.58□□□□□ -0.245e-7■■□□□ 11.6
SMNDC1O75940 OAZ1-205ENST00000589361 679 ntTSL 1 (best)14.29□□□□□ -0.121e-15■■□□□ 11.5
SMNDC1O75940 SNORA75-201ENST00000384158 137 ntBASIC7.36□□□□□ -1.231e-323■■□□□ 11.5
SMNDC1O75940 VPS13D-201ENST00000011700 10969 ntTSL 1 (best)6.19□□□□□ -1.421e-10■■□□□ 11.5
SMNDC1O75940 VPS13D-214ENST00000620676 16320 ntAPPRIS P4 TSL 1 (best) BASIC5.47□□□□□ -1.531e-10■■□□□ 11.5
SMNDC1O75940 VPS13D-213ENST00000613099 16245 ntAPPRIS ALT1 TSL 1 (best) BASIC5.29□□□□□ -1.561e-10■■□□□ 11.5
SMNDC1O75940 NOTUM-204ENST00000489218 972 ntTSL 217.1■□□□□ 0.331e-8■■□□□ 11.5
SMNDC1O75940 SNORA21B-201ENST00000516890 136 ntBASIC9.71□□□□□ -0.864e-40■■□□□ 11.5
SMNDC1O75940 PNN-204ENST00000554902 583 ntTSL 27.68□□□□□ -1.184e-10■■□□□ 11.5
SMNDC1O75940 TCP1-218ENST00000546204 566 ntTSL 29.83□□□□□ -0.844e-85■■□□□ 11.5
SMNDC1O75940 SNORA20-201ENST00000384662 132 ntBASIC3.97□□□□□ -1.774e-85■■□□□ 11.5
SMNDC1O75940 FASN-207ENST00000635197 627 ntTSL 314.39□□□□□ -0.117e-12■■□□□ 11.5
SMNDC1O75940 PNN-205ENST00000556530 601 ntTSL 2 BASIC17.65■□□□□ 0.424e-14■■□□□ 11.5
SMNDC1O75940 PNN-203ENST00000554117 624 ntTSL 29.76□□□□□ -0.854e-14■■□□□ 11.5
SMNDC1O75940 GET4-203ENST00000412734 873 ntTSL 213.35□□□□□ -0.275e-7■■□□□ 11.5
SMNDC1O75940 NCAPD2-204ENST00000536090 654 ntTSL 210.28□□□□□ -0.769e-7■■□□□ 11.5
Retrieved 100 of 11,362 protein–RNA pairs in 93 ms