Protein–RNA interactions for Protein: O60330

PCDHGA12, Protocadherin gamma-A12, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA12O60330 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
PCDHGA12O60330 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
PCDHGA12O60330 PHGDH-210ENST00000641115 1638 ntBASIC19.11■□□□□ 0.65
PCDHGA12O60330 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
PCDHGA12O60330 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
PCDHGA12O60330 MED25-212ENST00000618715 1467 ntTSL 5 BASIC19.1■□□□□ 0.65
PCDHGA12O60330 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
PCDHGA12O60330 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
PCDHGA12O60330 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
PCDHGA12O60330 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC19.1■□□□□ 0.65
PCDHGA12O60330 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
PCDHGA12O60330 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
PCDHGA12O60330 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
PCDHGA12O60330 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
PCDHGA12O60330 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
PCDHGA12O60330 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
PCDHGA12O60330 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
PCDHGA12O60330 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
PCDHGA12O60330 ISCU-203ENST00000431221 799 ntTSL 2 BASIC19.1■□□□□ 0.65
PCDHGA12O60330 SAPCD2P2-201ENST00000431719 1174 ntBASIC19.1■□□□□ 0.65
PCDHGA12O60330 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC19.1■□□□□ 0.65
PCDHGA12O60330 MFAP1P1-201ENST00000442257 1255 ntBASIC19.1■□□□□ 0.65
PCDHGA12O60330 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
PCDHGA12O60330 FAM207BP-201ENST00000447172 505 ntBASIC19.1■□□□□ 0.65
PCDHGA12O60330 AC008040.2-201ENST00000461049 708 ntBASIC19.1■□□□□ 0.65
PCDHGA12O60330 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC19.1■□□□□ 0.65
PCDHGA12O60330 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
PCDHGA12O60330 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
PCDHGA12O60330 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
PCDHGA12O60330 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
PCDHGA12O60330 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC19.1■□□□□ 0.65
PCDHGA12O60330 AL358472.4-201ENST00000633140 710 ntBASIC19.1■□□□□ 0.65
PCDHGA12O60330 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC19.1■□□□□ 0.65
PCDHGA12O60330 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
PCDHGA12O60330 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
PCDHGA12O60330 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
PCDHGA12O60330 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC19.1■□□□□ 0.65
PCDHGA12O60330 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC19.1■□□□□ 0.65
PCDHGA12O60330 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
PCDHGA12O60330 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
PCDHGA12O60330 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
PCDHGA12O60330 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC19.09■□□□□ 0.65
PCDHGA12O60330 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC19.09■□□□□ 0.65
PCDHGA12O60330 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
PCDHGA12O60330 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC19.09■□□□□ 0.65
PCDHGA12O60330 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC19.09■□□□□ 0.65
PCDHGA12O60330 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
PCDHGA12O60330 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
PCDHGA12O60330 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
PCDHGA12O60330 UPK3BP1-201ENST00000428678 509 ntBASIC19.09■□□□□ 0.65
PCDHGA12O60330 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC19.09■□□□□ 0.65
PCDHGA12O60330 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC19.09■□□□□ 0.65
PCDHGA12O60330 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC19.09■□□□□ 0.65
PCDHGA12O60330 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
PCDHGA12O60330 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
PCDHGA12O60330 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC19.09■□□□□ 0.65
PCDHGA12O60330 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC19.08■□□□□ 0.65
PCDHGA12O60330 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.65
PCDHGA12O60330 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
PCDHGA12O60330 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.65
PCDHGA12O60330 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.65
PCDHGA12O60330 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.65
PCDHGA12O60330 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
PCDHGA12O60330 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC19.08■□□□□ 0.65
PCDHGA12O60330 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.64
PCDHGA12O60330 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
PCDHGA12O60330 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
PCDHGA12O60330 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC19.08■□□□□ 0.64
PCDHGA12O60330 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
PCDHGA12O60330 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC19.08■□□□□ 0.64
PCDHGA12O60330 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC19.08■□□□□ 0.64
PCDHGA12O60330 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC19.08■□□□□ 0.64
PCDHGA12O60330 AC139887.4-201ENST00000607877 719 ntBASIC19.08■□□□□ 0.64
PCDHGA12O60330 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
PCDHGA12O60330 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
PCDHGA12O60330 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC19.08■□□□□ 0.64
PCDHGA12O60330 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC19.08■□□□□ 0.64
PCDHGA12O60330 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.64
PCDHGA12O60330 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
PCDHGA12O60330 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.64
PCDHGA12O60330 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
PCDHGA12O60330 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
PCDHGA12O60330 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC19.07■□□□□ 0.64
PCDHGA12O60330 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
PCDHGA12O60330 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC19.07■□□□□ 0.64
PCDHGA12O60330 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC19.07■□□□□ 0.64
PCDHGA12O60330 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC19.07■□□□□ 0.64
PCDHGA12O60330 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC19.07■□□□□ 0.64
PCDHGA12O60330 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC19.07■□□□□ 0.64
PCDHGA12O60330 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC19.07■□□□□ 0.64
PCDHGA12O60330 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC19.07■□□□□ 0.64
PCDHGA12O60330 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
PCDHGA12O60330 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC19.07■□□□□ 0.64
PCDHGA12O60330 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
PCDHGA12O60330 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC19.07■□□□□ 0.64
PCDHGA12O60330 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
PCDHGA12O60330 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
PCDHGA12O60330 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
PCDHGA12O60330 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
PCDHGA12O60330 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC19.07■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms