Protein–RNA interactions for Protein: O14817

TSPAN4, Tetraspanin-4, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4O14817 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TSPAN4O14817 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TSPAN4O14817 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC16.15■□□□□ 0.18
TSPAN4O14817 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC16.15■□□□□ 0.18
TSPAN4O14817 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC16.15■□□□□ 0.18
TSPAN4O14817 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
TSPAN4O14817 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
TSPAN4O14817 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC16.15■□□□□ 0.18
TSPAN4O14817 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TSPAN4O14817 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
TSPAN4O14817 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
TSPAN4O14817 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TSPAN4O14817 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
TSPAN4O14817 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
TSPAN4O14817 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC16.15■□□□□ 0.18
TSPAN4O14817 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
TSPAN4O14817 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC16.14■□□□□ 0.17
TSPAN4O14817 LINC02228-203ENST00000641970 1355 ntBASIC16.14■□□□□ 0.17
TSPAN4O14817 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
TSPAN4O14817 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
TSPAN4O14817 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TSPAN4O14817 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
TSPAN4O14817 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
TSPAN4O14817 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC16.14■□□□□ 0.17
TSPAN4O14817 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TSPAN4O14817 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
TSPAN4O14817 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TSPAN4O14817 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
TSPAN4O14817 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
TSPAN4O14817 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TSPAN4O14817 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TSPAN4O14817 TPRG1LP1-201ENST00000598702 760 ntBASIC16.14■□□□□ 0.17
TSPAN4O14817 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
TSPAN4O14817 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
TSPAN4O14817 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC16.14■□□□□ 0.17
TSPAN4O14817 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC16.14■□□□□ 0.17
TSPAN4O14817 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
TSPAN4O14817 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TSPAN4O14817 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC16.14■□□□□ 0.17
TSPAN4O14817 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TSPAN4O14817 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC16.14■□□□□ 0.17
TSPAN4O14817 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
TSPAN4O14817 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
TSPAN4O14817 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
TSPAN4O14817 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC16.14■□□□□ 0.17
TSPAN4O14817 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC16.14■□□□□ 0.17
TSPAN4O14817 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
TSPAN4O14817 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC16.13■□□□□ 0.17
TSPAN4O14817 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
TSPAN4O14817 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
TSPAN4O14817 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
TSPAN4O14817 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC16.13■□□□□ 0.17
TSPAN4O14817 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
TSPAN4O14817 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
TSPAN4O14817 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC16.13■□□□□ 0.17
TSPAN4O14817 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC16.13■□□□□ 0.17
TSPAN4O14817 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC16.13■□□□□ 0.17
TSPAN4O14817 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
TSPAN4O14817 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
TSPAN4O14817 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC16.13■□□□□ 0.17
TSPAN4O14817 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC16.13■□□□□ 0.17
TSPAN4O14817 AC005224.4-201ENST00000583262 1652 ntBASIC16.13■□□□□ 0.17
TSPAN4O14817 AL596257.1-201ENST00000641463 2694 ntBASIC16.13■□□□□ 0.17
TSPAN4O14817 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
TSPAN4O14817 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
TSPAN4O14817 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
TSPAN4O14817 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC16.13■□□□□ 0.17
TSPAN4O14817 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC16.13■□□□□ 0.17
TSPAN4O14817 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
TSPAN4O14817 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
TSPAN4O14817 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
TSPAN4O14817 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC16.13■□□□□ 0.17
TSPAN4O14817 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC16.13■□□□□ 0.17
TSPAN4O14817 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC16.13■□□□□ 0.17
TSPAN4O14817 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC16.13■□□□□ 0.17
TSPAN4O14817 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
TSPAN4O14817 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
TSPAN4O14817 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC16.12■□□□□ 0.17
TSPAN4O14817 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TSPAN4O14817 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC16.12■□□□□ 0.17
TSPAN4O14817 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC16.12■□□□□ 0.17
TSPAN4O14817 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
TSPAN4O14817 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
TSPAN4O14817 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC16.12■□□□□ 0.17
TSPAN4O14817 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
TSPAN4O14817 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TSPAN4O14817 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
TSPAN4O14817 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TSPAN4O14817 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TSPAN4O14817 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
TSPAN4O14817 AC097381.1-201ENST00000429019 1296 ntBASIC16.12■□□□□ 0.17
TSPAN4O14817 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC16.12■□□□□ 0.17
TSPAN4O14817 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
TSPAN4O14817 MIR6821-201ENST00000617625 74 ntBASIC16.12■□□□□ 0.17
TSPAN4O14817 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC16.12■□□□□ 0.17
TSPAN4O14817 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
TSPAN4O14817 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TSPAN4O14817 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
TSPAN4O14817 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
TSPAN4O14817 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 70.3 ms