Protein–RNA interactions for Protein: O00635

TRIM38, E3 ubiquitin-protein ligase TRIM38, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM38O00635 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
TRIM38O00635 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
TRIM38O00635 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC19.37■□□□□ 0.69
TRIM38O00635 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC19.37■□□□□ 0.69
TRIM38O00635 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
TRIM38O00635 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC19.37■□□□□ 0.69
TRIM38O00635 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC19.37■□□□□ 0.69
TRIM38O00635 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
TRIM38O00635 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
TRIM38O00635 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
TRIM38O00635 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC19.37■□□□□ 0.69
TRIM38O00635 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC19.37■□□□□ 0.69
TRIM38O00635 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
TRIM38O00635 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
TRIM38O00635 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC19.37■□□□□ 0.69
TRIM38O00635 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC19.37■□□□□ 0.69
TRIM38O00635 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC19.37■□□□□ 0.69
TRIM38O00635 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC19.37■□□□□ 0.69
TRIM38O00635 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
TRIM38O00635 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
TRIM38O00635 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC19.37■□□□□ 0.69
TRIM38O00635 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
TRIM38O00635 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
TRIM38O00635 AC004408.2-201ENST00000623613 2777 ntBASIC19.37■□□□□ 0.69
TRIM38O00635 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
TRIM38O00635 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
TRIM38O00635 H19-201ENST00000411754 1788 ntTSL 5 BASIC19.37■□□□□ 0.69
TRIM38O00635 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC19.37■□□□□ 0.69
TRIM38O00635 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
TRIM38O00635 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
TRIM38O00635 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
TRIM38O00635 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
TRIM38O00635 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
TRIM38O00635 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC19.36■□□□□ 0.69
TRIM38O00635 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
TRIM38O00635 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
TRIM38O00635 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
TRIM38O00635 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
TRIM38O00635 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
TRIM38O00635 AC005332.7-201ENST00000614046 2005 ntBASIC19.36■□□□□ 0.69
TRIM38O00635 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC19.36■□□□□ 0.69
TRIM38O00635 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC19.36■□□□□ 0.69
TRIM38O00635 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC19.36■□□□□ 0.69
TRIM38O00635 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC19.36■□□□□ 0.69
TRIM38O00635 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC19.36■□□□□ 0.69
TRIM38O00635 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
TRIM38O00635 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC19.36■□□□□ 0.69
TRIM38O00635 GLDC-219ENST00000640208 420 ntTSL 2 BASIC19.36■□□□□ 0.69
TRIM38O00635 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
TRIM38O00635 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
TRIM38O00635 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
TRIM38O00635 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
TRIM38O00635 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
TRIM38O00635 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC19.36■□□□□ 0.69
TRIM38O00635 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
TRIM38O00635 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC19.36■□□□□ 0.69
TRIM38O00635 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
TRIM38O00635 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC19.35■□□□□ 0.69
TRIM38O00635 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
TRIM38O00635 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
TRIM38O00635 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
TRIM38O00635 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC19.35■□□□□ 0.69
TRIM38O00635 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC19.35■□□□□ 0.69
TRIM38O00635 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
TRIM38O00635 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
TRIM38O00635 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
TRIM38O00635 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
TRIM38O00635 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
TRIM38O00635 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
TRIM38O00635 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
TRIM38O00635 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC19.35■□□□□ 0.69
TRIM38O00635 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
TRIM38O00635 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC19.35■□□□□ 0.69
TRIM38O00635 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
TRIM38O00635 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC19.35■□□□□ 0.69
TRIM38O00635 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
TRIM38O00635 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
TRIM38O00635 NIFKP9-201ENST00000419265 221 ntBASIC19.35■□□□□ 0.69
TRIM38O00635 AL390955.1-201ENST00000428694 934 ntBASIC19.35■□□□□ 0.69
TRIM38O00635 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC19.35■□□□□ 0.69
TRIM38O00635 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC19.35■□□□□ 0.69
TRIM38O00635 KSR1P1-201ENST00000446298 240 ntBASIC19.35■□□□□ 0.69
TRIM38O00635 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC19.35■□□□□ 0.69
TRIM38O00635 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
TRIM38O00635 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC19.35■□□□□ 0.69
TRIM38O00635 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC19.35■□□□□ 0.69
TRIM38O00635 AC005363.2-201ENST00000618631 242 ntBASIC19.35■□□□□ 0.69
TRIM38O00635 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
TRIM38O00635 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC19.35■□□□□ 0.69
TRIM38O00635 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC19.35■□□□□ 0.69
TRIM38O00635 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC19.35■□□□□ 0.69
TRIM38O00635 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
TRIM38O00635 KRT8P17-201ENST00000453110 1448 ntBASIC19.34■□□□□ 0.69
TRIM38O00635 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
TRIM38O00635 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
TRIM38O00635 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
TRIM38O00635 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC19.34■□□□□ 0.69
TRIM38O00635 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
TRIM38O00635 CALM3-202ENST00000391918 702 ntTSL 2 BASIC19.34■□□□□ 0.69
TRIM38O00635 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC19.34■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms