Protein–RNA interactions for Protein: A0A1B0GTZ2

CCDC196, Putative coiled-coil domain-containing protein 196, humanhuman

Predictions only

Length 297 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC196A0A1B0GTZ2 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC22.43■■□□□ 1.18
CCDC196A0A1B0GTZ2 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC22.43■■□□□ 1.18
CCDC196A0A1B0GTZ2 AP001412.1-201ENST00000608405 714 ntBASIC22.43■■□□□ 1.18
CCDC196A0A1B0GTZ2 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC22.43■■□□□ 1.18
CCDC196A0A1B0GTZ2 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
CCDC196A0A1B0GTZ2 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC22.43■■□□□ 1.18
CCDC196A0A1B0GTZ2 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC22.43■■□□□ 1.18
CCDC196A0A1B0GTZ2 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC22.43■■□□□ 1.18
CCDC196A0A1B0GTZ2 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC22.43■■□□□ 1.18
CCDC196A0A1B0GTZ2 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
CCDC196A0A1B0GTZ2 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC22.43■■□□□ 1.18
CCDC196A0A1B0GTZ2 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC22.42■■□□□ 1.18
CCDC196A0A1B0GTZ2 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC22.42■■□□□ 1.18
CCDC196A0A1B0GTZ2 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC22.42■■□□□ 1.18
CCDC196A0A1B0GTZ2 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC22.42■■□□□ 1.18
CCDC196A0A1B0GTZ2 MME-217ENST00000616757 1315 ntTSL 5 BASIC22.42■■□□□ 1.18
CCDC196A0A1B0GTZ2 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
CCDC196A0A1B0GTZ2 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
CCDC196A0A1B0GTZ2 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC22.42■■□□□ 1.18
CCDC196A0A1B0GTZ2 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
CCDC196A0A1B0GTZ2 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
CCDC196A0A1B0GTZ2 AC012618.2-201ENST00000428058 849 ntBASIC22.42■■□□□ 1.18
CCDC196A0A1B0GTZ2 PPP1R14BP5-201ENST00000440334 435 ntBASIC22.42■■□□□ 1.18
CCDC196A0A1B0GTZ2 RPS2P4-201ENST00000476944 856 ntBASIC22.42■■□□□ 1.18
CCDC196A0A1B0GTZ2 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC22.42■■□□□ 1.18
CCDC196A0A1B0GTZ2 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC22.42■■□□□ 1.18
CCDC196A0A1B0GTZ2 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC22.42■■□□□ 1.18
CCDC196A0A1B0GTZ2 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC22.42■■□□□ 1.18
CCDC196A0A1B0GTZ2 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
CCDC196A0A1B0GTZ2 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC22.42■■□□□ 1.18
CCDC196A0A1B0GTZ2 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC22.42■■□□□ 1.18
CCDC196A0A1B0GTZ2 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
CCDC196A0A1B0GTZ2 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
CCDC196A0A1B0GTZ2 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC22.41■■□□□ 1.18
CCDC196A0A1B0GTZ2 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
CCDC196A0A1B0GTZ2 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
CCDC196A0A1B0GTZ2 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
CCDC196A0A1B0GTZ2 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
CCDC196A0A1B0GTZ2 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC22.41■■□□□ 1.18
CCDC196A0A1B0GTZ2 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC22.41■■□□□ 1.18
CCDC196A0A1B0GTZ2 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
CCDC196A0A1B0GTZ2 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC22.41■■□□□ 1.18
CCDC196A0A1B0GTZ2 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC22.41■■□□□ 1.18
CCDC196A0A1B0GTZ2 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
CCDC196A0A1B0GTZ2 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC22.41■■□□□ 1.18
CCDC196A0A1B0GTZ2 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC22.41■■□□□ 1.18
CCDC196A0A1B0GTZ2 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC22.41■■□□□ 1.18
CCDC196A0A1B0GTZ2 RPS2P55-201ENST00000397318 883 ntBASIC22.41■■□□□ 1.18
CCDC196A0A1B0GTZ2 AC004980.1-204ENST00000429707 299 ntBASIC22.41■■□□□ 1.18
CCDC196A0A1B0GTZ2 PTPA-216ENST00000432651 857 ntTSL 2 BASIC22.41■■□□□ 1.18
CCDC196A0A1B0GTZ2 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
CCDC196A0A1B0GTZ2 AC107956.1-201ENST00000494359 873 ntBASIC22.41■■□□□ 1.18
CCDC196A0A1B0GTZ2 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
CCDC196A0A1B0GTZ2 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC22.41■■□□□ 1.18
CCDC196A0A1B0GTZ2 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC22.41■■□□□ 1.18
CCDC196A0A1B0GTZ2 AC026271.3-201ENST00000571884 352 ntBASIC22.41■■□□□ 1.18
CCDC196A0A1B0GTZ2 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC22.41■■□□□ 1.18
CCDC196A0A1B0GTZ2 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC22.41■■□□□ 1.18
CCDC196A0A1B0GTZ2 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC22.41■■□□□ 1.18
CCDC196A0A1B0GTZ2 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC22.41■■□□□ 1.18
CCDC196A0A1B0GTZ2 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC22.41■■□□□ 1.18
CCDC196A0A1B0GTZ2 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
CCDC196A0A1B0GTZ2 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC22.41■■□□□ 1.18
CCDC196A0A1B0GTZ2 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
CCDC196A0A1B0GTZ2 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC22.41■■□□□ 1.18
CCDC196A0A1B0GTZ2 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC22.41■■□□□ 1.18
CCDC196A0A1B0GTZ2 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC22.41■■□□□ 1.18
CCDC196A0A1B0GTZ2 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC22.41■■□□□ 1.18
CCDC196A0A1B0GTZ2 AC141586.3-201ENST00000562166 1838 ntBASIC22.41■■□□□ 1.18
CCDC196A0A1B0GTZ2 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC22.4■■□□□ 1.18
CCDC196A0A1B0GTZ2 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
CCDC196A0A1B0GTZ2 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC22.4■■□□□ 1.18
CCDC196A0A1B0GTZ2 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
CCDC196A0A1B0GTZ2 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
CCDC196A0A1B0GTZ2 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
CCDC196A0A1B0GTZ2 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC22.4■■□□□ 1.18
CCDC196A0A1B0GTZ2 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
CCDC196A0A1B0GTZ2 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC22.4■■□□□ 1.18
CCDC196A0A1B0GTZ2 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
CCDC196A0A1B0GTZ2 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
CCDC196A0A1B0GTZ2 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC22.4■■□□□ 1.18
CCDC196A0A1B0GTZ2 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC22.4■■□□□ 1.18
CCDC196A0A1B0GTZ2 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC22.4■■□□□ 1.18
CCDC196A0A1B0GTZ2 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC22.4■■□□□ 1.18
CCDC196A0A1B0GTZ2 CR392000.1-201ENST00000624770 1228 ntBASIC22.4■■□□□ 1.18
CCDC196A0A1B0GTZ2 AL031985.4-201ENST00000642138 673 ntBASIC22.4■■□□□ 1.18
CCDC196A0A1B0GTZ2 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
CCDC196A0A1B0GTZ2 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
CCDC196A0A1B0GTZ2 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC22.4■■□□□ 1.18
CCDC196A0A1B0GTZ2 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC22.4■■□□□ 1.18
CCDC196A0A1B0GTZ2 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
CCDC196A0A1B0GTZ2 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC22.39■■□□□ 1.18
CCDC196A0A1B0GTZ2 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC22.39■■□□□ 1.18
CCDC196A0A1B0GTZ2 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC22.39■■□□□ 1.17
CCDC196A0A1B0GTZ2 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC22.39■■□□□ 1.17
CCDC196A0A1B0GTZ2 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC22.39■■□□□ 1.17
CCDC196A0A1B0GTZ2 SAPCD2P4-201ENST00000424595 1171 ntBASIC22.39■■□□□ 1.17
CCDC196A0A1B0GTZ2 Z85996.1-201ENST00000494644 937 ntBASIC22.39■■□□□ 1.17
CCDC196A0A1B0GTZ2 AC233702.5-201ENST00000584107 538 ntBASIC22.39■■□□□ 1.17
CCDC196A0A1B0GTZ2 USP36-216ENST00000589424 970 ntTSL 5 BASIC22.39■■□□□ 1.17
Retrieved 100 of 98,524 protein–RNA pairs in 22.9 ms