Protein–RNA interactions for Protein: Q9Y5Y9

SCN10A, Sodium channel protein type 10 subunit alpha, humanhuman

Predictions only

Length 1,956 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN10AQ9Y5Y9 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
SCN10AQ9Y5Y9 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC21.2■□□□□ 0.98
SCN10AQ9Y5Y9 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
SCN10AQ9Y5Y9 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC21.2■□□□□ 0.98
SCN10AQ9Y5Y9 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
SCN10AQ9Y5Y9 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC21.2■□□□□ 0.98
SCN10AQ9Y5Y9 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
SCN10AQ9Y5Y9 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC21.2■□□□□ 0.98
SCN10AQ9Y5Y9 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
SCN10AQ9Y5Y9 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC21.2■□□□□ 0.98
SCN10AQ9Y5Y9 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC21.2■□□□□ 0.98
SCN10AQ9Y5Y9 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC21.2■□□□□ 0.98
SCN10AQ9Y5Y9 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC21.2■□□□□ 0.98
SCN10AQ9Y5Y9 CLN6-214ENST00000636314 442 ntTSL 3 BASIC21.2■□□□□ 0.98
SCN10AQ9Y5Y9 ZNF815P-204ENST00000434898 1737 ntBASIC21.2■□□□□ 0.98
SCN10AQ9Y5Y9 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC21.2■□□□□ 0.98
SCN10AQ9Y5Y9 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC21.2■□□□□ 0.98
SCN10AQ9Y5Y9 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC21.2■□□□□ 0.98
SCN10AQ9Y5Y9 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.98
SCN10AQ9Y5Y9 AL391422.3-201ENST00000603791 2761 ntBASIC21.2■□□□□ 0.98
SCN10AQ9Y5Y9 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC21.2■□□□□ 0.98
SCN10AQ9Y5Y9 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
SCN10AQ9Y5Y9 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
SCN10AQ9Y5Y9 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC21.2■□□□□ 0.98
SCN10AQ9Y5Y9 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC21.2■□□□□ 0.98
SCN10AQ9Y5Y9 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
SCN10AQ9Y5Y9 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
SCN10AQ9Y5Y9 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
SCN10AQ9Y5Y9 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC21.19■□□□□ 0.98
SCN10AQ9Y5Y9 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC21.19■□□□□ 0.98
SCN10AQ9Y5Y9 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
SCN10AQ9Y5Y9 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC21.19■□□□□ 0.98
SCN10AQ9Y5Y9 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC21.19■□□□□ 0.98
SCN10AQ9Y5Y9 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
SCN10AQ9Y5Y9 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
SCN10AQ9Y5Y9 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
SCN10AQ9Y5Y9 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
SCN10AQ9Y5Y9 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
SCN10AQ9Y5Y9 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC21.19■□□□□ 0.98
SCN10AQ9Y5Y9 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC21.18■□□□□ 0.98
SCN10AQ9Y5Y9 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC21.18■□□□□ 0.98
SCN10AQ9Y5Y9 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC21.18■□□□□ 0.98
SCN10AQ9Y5Y9 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
SCN10AQ9Y5Y9 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC21.18■□□□□ 0.98
SCN10AQ9Y5Y9 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
SCN10AQ9Y5Y9 IPPK-202ENST00000375522 882 ntTSL 3 BASIC21.18■□□□□ 0.98
SCN10AQ9Y5Y9 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC21.18■□□□□ 0.98
SCN10AQ9Y5Y9 NPAP1P7-201ENST00000613027 823 ntBASIC21.18■□□□□ 0.98
SCN10AQ9Y5Y9 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC21.18■□□□□ 0.98
SCN10AQ9Y5Y9 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC21.18■□□□□ 0.98
SCN10AQ9Y5Y9 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
SCN10AQ9Y5Y9 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC21.17■□□□□ 0.98
SCN10AQ9Y5Y9 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC21.17■□□□□ 0.98
SCN10AQ9Y5Y9 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
SCN10AQ9Y5Y9 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
SCN10AQ9Y5Y9 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
SCN10AQ9Y5Y9 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
SCN10AQ9Y5Y9 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
SCN10AQ9Y5Y9 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
SCN10AQ9Y5Y9 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
SCN10AQ9Y5Y9 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC21.17■□□□□ 0.98
SCN10AQ9Y5Y9 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
SCN10AQ9Y5Y9 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
SCN10AQ9Y5Y9 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC21.17■□□□□ 0.98
SCN10AQ9Y5Y9 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC21.17■□□□□ 0.98
SCN10AQ9Y5Y9 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
SCN10AQ9Y5Y9 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
SCN10AQ9Y5Y9 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
SCN10AQ9Y5Y9 ATP5G2P1-201ENST00000433580 426 ntBASIC21.17■□□□□ 0.98
SCN10AQ9Y5Y9 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC21.17■□□□□ 0.98
SCN10AQ9Y5Y9 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC21.17■□□□□ 0.98
SCN10AQ9Y5Y9 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC21.17■□□□□ 0.98
SCN10AQ9Y5Y9 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC21.17■□□□□ 0.98
SCN10AQ9Y5Y9 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
SCN10AQ9Y5Y9 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
SCN10AQ9Y5Y9 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC21.16■□□□□ 0.98
SCN10AQ9Y5Y9 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
SCN10AQ9Y5Y9 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC21.16■□□□□ 0.98
SCN10AQ9Y5Y9 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
SCN10AQ9Y5Y9 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC21.16■□□□□ 0.98
SCN10AQ9Y5Y9 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
SCN10AQ9Y5Y9 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
SCN10AQ9Y5Y9 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
SCN10AQ9Y5Y9 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
SCN10AQ9Y5Y9 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
SCN10AQ9Y5Y9 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC21.16■□□□□ 0.98
SCN10AQ9Y5Y9 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
SCN10AQ9Y5Y9 AC099778.1-201ENST00000568593 1911 ntBASIC21.16■□□□□ 0.98
SCN10AQ9Y5Y9 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
SCN10AQ9Y5Y9 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC21.16■□□□□ 0.98
SCN10AQ9Y5Y9 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
SCN10AQ9Y5Y9 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC21.16■□□□□ 0.98
SCN10AQ9Y5Y9 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC21.16■□□□□ 0.98
SCN10AQ9Y5Y9 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC21.15■□□□□ 0.98
SCN10AQ9Y5Y9 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC21.15■□□□□ 0.98
SCN10AQ9Y5Y9 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
SCN10AQ9Y5Y9 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
SCN10AQ9Y5Y9 LINC01311-201ENST00000565162 1445 ntBASIC21.15■□□□□ 0.98
SCN10AQ9Y5Y9 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
SCN10AQ9Y5Y9 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 58.1 ms