Protein–RNA interactions for Protein: Q9Y5G7

PCDHGA6, Protocadherin gamma-A6, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA6Q9Y5G7 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
PCDHGA6Q9Y5G7 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
PCDHGA6Q9Y5G7 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
PCDHGA6Q9Y5G7 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC18.59■□□□□ 0.57
PCDHGA6Q9Y5G7 TMPOP1-202ENST00000424642 1267 ntBASIC18.59■□□□□ 0.57
PCDHGA6Q9Y5G7 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC18.59■□□□□ 0.57
PCDHGA6Q9Y5G7 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC18.59■□□□□ 0.57
PCDHGA6Q9Y5G7 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC18.59■□□□□ 0.57
PCDHGA6Q9Y5G7 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
PCDHGA6Q9Y5G7 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC18.59■□□□□ 0.57
PCDHGA6Q9Y5G7 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC18.59■□□□□ 0.57
PCDHGA6Q9Y5G7 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC18.59■□□□□ 0.57
PCDHGA6Q9Y5G7 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
PCDHGA6Q9Y5G7 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC18.59■□□□□ 0.57
PCDHGA6Q9Y5G7 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
PCDHGA6Q9Y5G7 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
PCDHGA6Q9Y5G7 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
PCDHGA6Q9Y5G7 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
PCDHGA6Q9Y5G7 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
PCDHGA6Q9Y5G7 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
PCDHGA6Q9Y5G7 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.57
PCDHGA6Q9Y5G7 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC18.58■□□□□ 0.57
PCDHGA6Q9Y5G7 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
PCDHGA6Q9Y5G7 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC18.58■□□□□ 0.57
PCDHGA6Q9Y5G7 H19-201ENST00000411754 1788 ntTSL 5 BASIC18.58■□□□□ 0.57
PCDHGA6Q9Y5G7 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC18.58■□□□□ 0.57
PCDHGA6Q9Y5G7 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.57
PCDHGA6Q9Y5G7 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.57
PCDHGA6Q9Y5G7 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC18.58■□□□□ 0.57
PCDHGA6Q9Y5G7 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
PCDHGA6Q9Y5G7 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC18.58■□□□□ 0.56
PCDHGA6Q9Y5G7 AP000525.1-201ENST00000608286 694 ntBASIC18.58■□□□□ 0.56
PCDHGA6Q9Y5G7 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC18.58■□□□□ 0.56
PCDHGA6Q9Y5G7 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC18.58■□□□□ 0.56
PCDHGA6Q9Y5G7 CR392000.1-201ENST00000624770 1228 ntBASIC18.58■□□□□ 0.56
PCDHGA6Q9Y5G7 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.56
PCDHGA6Q9Y5G7 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.56
PCDHGA6Q9Y5G7 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.56
PCDHGA6Q9Y5G7 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
PCDHGA6Q9Y5G7 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
PCDHGA6Q9Y5G7 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
PCDHGA6Q9Y5G7 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
PCDHGA6Q9Y5G7 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC18.58■□□□□ 0.56
PCDHGA6Q9Y5G7 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
PCDHGA6Q9Y5G7 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
PCDHGA6Q9Y5G7 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC18.58■□□□□ 0.56
PCDHGA6Q9Y5G7 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
PCDHGA6Q9Y5G7 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC18.57■□□□□ 0.56
PCDHGA6Q9Y5G7 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PCDHGA6Q9Y5G7 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
PCDHGA6Q9Y5G7 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
PCDHGA6Q9Y5G7 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
PCDHGA6Q9Y5G7 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PCDHGA6Q9Y5G7 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC18.57■□□□□ 0.56
PCDHGA6Q9Y5G7 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC18.57■□□□□ 0.56
PCDHGA6Q9Y5G7 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC18.57■□□□□ 0.56
PCDHGA6Q9Y5G7 FITM1-202ENST00000559294 800 ntBASIC18.57■□□□□ 0.56
PCDHGA6Q9Y5G7 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC18.57■□□□□ 0.56
PCDHGA6Q9Y5G7 MIR6786-201ENST00000616843 113 ntBASIC18.57■□□□□ 0.56
PCDHGA6Q9Y5G7 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PCDHGA6Q9Y5G7 AC092865.7-201ENST00000641832 219 ntBASIC18.57■□□□□ 0.56
PCDHGA6Q9Y5G7 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC18.57■□□□□ 0.56
PCDHGA6Q9Y5G7 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
PCDHGA6Q9Y5G7 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
PCDHGA6Q9Y5G7 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
PCDHGA6Q9Y5G7 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC18.57■□□□□ 0.56
PCDHGA6Q9Y5G7 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC18.57■□□□□ 0.56
PCDHGA6Q9Y5G7 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
PCDHGA6Q9Y5G7 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC18.56■□□□□ 0.56
PCDHGA6Q9Y5G7 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC18.56■□□□□ 0.56
PCDHGA6Q9Y5G7 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
PCDHGA6Q9Y5G7 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
PCDHGA6Q9Y5G7 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
PCDHGA6Q9Y5G7 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC18.56■□□□□ 0.56
PCDHGA6Q9Y5G7 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
PCDHGA6Q9Y5G7 TNXA-203ENST00000507684 2038 ntBASIC18.56■□□□□ 0.56
PCDHGA6Q9Y5G7 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
PCDHGA6Q9Y5G7 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
PCDHGA6Q9Y5G7 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
PCDHGA6Q9Y5G7 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC18.56■□□□□ 0.56
PCDHGA6Q9Y5G7 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC18.56■□□□□ 0.56
PCDHGA6Q9Y5G7 AC005363.2-201ENST00000618631 242 ntBASIC18.56■□□□□ 0.56
PCDHGA6Q9Y5G7 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC18.56■□□□□ 0.56
PCDHGA6Q9Y5G7 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC18.56■□□□□ 0.56
PCDHGA6Q9Y5G7 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
PCDHGA6Q9Y5G7 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
PCDHGA6Q9Y5G7 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
PCDHGA6Q9Y5G7 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
PCDHGA6Q9Y5G7 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
PCDHGA6Q9Y5G7 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
PCDHGA6Q9Y5G7 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
PCDHGA6Q9Y5G7 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
PCDHGA6Q9Y5G7 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
PCDHGA6Q9Y5G7 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC18.55■□□□□ 0.56
PCDHGA6Q9Y5G7 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
PCDHGA6Q9Y5G7 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
PCDHGA6Q9Y5G7 DPP3P2-201ENST00000416030 1696 ntBASIC18.55■□□□□ 0.56
PCDHGA6Q9Y5G7 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
PCDHGA6Q9Y5G7 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC18.55■□□□□ 0.56
PCDHGA6Q9Y5G7 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC18.55■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 20.2 ms