Protein–RNA interactions for Protein: Q9Y587

AP4S1, AP-4 complex subunit sigma-1, humanhuman

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4S1Q9Y587 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
AP4S1Q9Y587 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC18.26■□□□□ 0.51
AP4S1Q9Y587 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC18.26■□□□□ 0.51
AP4S1Q9Y587 AC019069.1-201ENST00000610008 1333 ntBASIC18.25■□□□□ 0.51
AP4S1Q9Y587 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC18.25■□□□□ 0.51
AP4S1Q9Y587 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
AP4S1Q9Y587 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC18.25■□□□□ 0.51
AP4S1Q9Y587 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
AP4S1Q9Y587 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC18.25■□□□□ 0.51
AP4S1Q9Y587 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
AP4S1Q9Y587 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
AP4S1Q9Y587 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC18.25■□□□□ 0.51
AP4S1Q9Y587 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
AP4S1Q9Y587 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
AP4S1Q9Y587 HLA-G-202ENST00000376815 851 ntBASIC18.25■□□□□ 0.51
AP4S1Q9Y587 HLA-G-203ENST00000376818 1127 ntBASIC18.25■□□□□ 0.51
AP4S1Q9Y587 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC18.25■□□□□ 0.51
AP4S1Q9Y587 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
AP4S1Q9Y587 PBX2P1-201ENST00000493219 1291 ntBASIC18.25■□□□□ 0.51
AP4S1Q9Y587 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC18.25■□□□□ 0.51
AP4S1Q9Y587 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC18.25■□□□□ 0.51
AP4S1Q9Y587 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC18.25■□□□□ 0.51
AP4S1Q9Y587 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC18.25■□□□□ 0.51
AP4S1Q9Y587 MIR6084-201ENST00000622012 110 ntBASIC18.25■□□□□ 0.51
AP4S1Q9Y587 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC18.25■□□□□ 0.51
AP4S1Q9Y587 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC18.25■□□□□ 0.51
AP4S1Q9Y587 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC18.25■□□□□ 0.51
AP4S1Q9Y587 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
AP4S1Q9Y587 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
AP4S1Q9Y587 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC18.25■□□□□ 0.51
AP4S1Q9Y587 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
AP4S1Q9Y587 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
AP4S1Q9Y587 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
AP4S1Q9Y587 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC18.24■□□□□ 0.51
AP4S1Q9Y587 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC18.24■□□□□ 0.51
AP4S1Q9Y587 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
AP4S1Q9Y587 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC18.24■□□□□ 0.51
AP4S1Q9Y587 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
AP4S1Q9Y587 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC18.24■□□□□ 0.51
AP4S1Q9Y587 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
AP4S1Q9Y587 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
AP4S1Q9Y587 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
AP4S1Q9Y587 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
AP4S1Q9Y587 MIR939-201ENST00000401314 82 ntBASIC18.24■□□□□ 0.51
AP4S1Q9Y587 AC091305.1-201ENST00000479476 895 ntBASIC18.24■□□□□ 0.51
AP4S1Q9Y587 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC18.24■□□□□ 0.51
AP4S1Q9Y587 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC18.24■□□□□ 0.51
AP4S1Q9Y587 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
AP4S1Q9Y587 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC18.24■□□□□ 0.51
AP4S1Q9Y587 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
AP4S1Q9Y587 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC18.24■□□□□ 0.51
AP4S1Q9Y587 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC18.24■□□□□ 0.51
AP4S1Q9Y587 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC18.24■□□□□ 0.51
AP4S1Q9Y587 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
AP4S1Q9Y587 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
AP4S1Q9Y587 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
AP4S1Q9Y587 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC18.24■□□□□ 0.51
AP4S1Q9Y587 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC18.24■□□□□ 0.51
AP4S1Q9Y587 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
AP4S1Q9Y587 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
AP4S1Q9Y587 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
AP4S1Q9Y587 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC18.24■□□□□ 0.51
AP4S1Q9Y587 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
AP4S1Q9Y587 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
AP4S1Q9Y587 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
AP4S1Q9Y587 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
AP4S1Q9Y587 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
AP4S1Q9Y587 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC18.23■□□□□ 0.51
AP4S1Q9Y587 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
AP4S1Q9Y587 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
AP4S1Q9Y587 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
AP4S1Q9Y587 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
AP4S1Q9Y587 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC18.23■□□□□ 0.51
AP4S1Q9Y587 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
AP4S1Q9Y587 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC18.23■□□□□ 0.51
AP4S1Q9Y587 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
AP4S1Q9Y587 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
AP4S1Q9Y587 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC18.23■□□□□ 0.51
AP4S1Q9Y587 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
AP4S1Q9Y587 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
AP4S1Q9Y587 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC18.23■□□□□ 0.51
AP4S1Q9Y587 CASP6-205ENST00000505486 538 ntTSL 4 BASIC18.23■□□□□ 0.51
AP4S1Q9Y587 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC18.23■□□□□ 0.51
AP4S1Q9Y587 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC18.23■□□□□ 0.51
AP4S1Q9Y587 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
AP4S1Q9Y587 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC18.23■□□□□ 0.51
AP4S1Q9Y587 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC18.23■□□□□ 0.51
AP4S1Q9Y587 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
AP4S1Q9Y587 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
AP4S1Q9Y587 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC18.23■□□□□ 0.51
AP4S1Q9Y587 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
AP4S1Q9Y587 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC18.22■□□□□ 0.51
AP4S1Q9Y587 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
AP4S1Q9Y587 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
AP4S1Q9Y587 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
AP4S1Q9Y587 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
AP4S1Q9Y587 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
AP4S1Q9Y587 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC18.22■□□□□ 0.51
AP4S1Q9Y587 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
AP4S1Q9Y587 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 41.7 ms