Protein–RNA interactions for Protein: Q9NZI2

KCNIP1, Kv channel-interacting protein 1, humanhuman

Predictions only

Length 227 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP1Q9NZI2 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
KCNIP1Q9NZI2 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC16.21■□□□□ 0.19
KCNIP1Q9NZI2 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
KCNIP1Q9NZI2 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC16.21■□□□□ 0.19
KCNIP1Q9NZI2 NCF1B-203ENST00000435988 1254 ntBASIC16.21■□□□□ 0.19
KCNIP1Q9NZI2 ABHD17AP6-201ENST00000458502 1044 ntBASIC16.21■□□□□ 0.19
KCNIP1Q9NZI2 RHEB-204ENST00000472642 900 ntTSL 3 BASIC16.21■□□□□ 0.19
KCNIP1Q9NZI2 REXO2-208ENST00000539754 791 ntTSL 2 BASIC16.21■□□□□ 0.19
KCNIP1Q9NZI2 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC16.21■□□□□ 0.19
KCNIP1Q9NZI2 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
KCNIP1Q9NZI2 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC16.21■□□□□ 0.19
KCNIP1Q9NZI2 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
KCNIP1Q9NZI2 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
KCNIP1Q9NZI2 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
KCNIP1Q9NZI2 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
KCNIP1Q9NZI2 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC16.21■□□□□ 0.19
KCNIP1Q9NZI2 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
KCNIP1Q9NZI2 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC16.21■□□□□ 0.19
KCNIP1Q9NZI2 LINC01465-201ENST00000408887 1940 ntBASIC16.21■□□□□ 0.19
KCNIP1Q9NZI2 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC16.21■□□□□ 0.18
KCNIP1Q9NZI2 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC16.21■□□□□ 0.18
KCNIP1Q9NZI2 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.18
KCNIP1Q9NZI2 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC16.21■□□□□ 0.18
KCNIP1Q9NZI2 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
KCNIP1Q9NZI2 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
KCNIP1Q9NZI2 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC16.2■□□□□ 0.18
KCNIP1Q9NZI2 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC16.2■□□□□ 0.18
KCNIP1Q9NZI2 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
KCNIP1Q9NZI2 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC16.2■□□□□ 0.18
KCNIP1Q9NZI2 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
KCNIP1Q9NZI2 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
KCNIP1Q9NZI2 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC16.2■□□□□ 0.18
KCNIP1Q9NZI2 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
KCNIP1Q9NZI2 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
KCNIP1Q9NZI2 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
KCNIP1Q9NZI2 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
KCNIP1Q9NZI2 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC16.2■□□□□ 0.18
KCNIP1Q9NZI2 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
KCNIP1Q9NZI2 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
KCNIP1Q9NZI2 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
KCNIP1Q9NZI2 PPP1R14BP2-201ENST00000426284 444 ntBASIC16.2■□□□□ 0.18
KCNIP1Q9NZI2 TSPY6P-201ENST00000448518 926 ntBASIC16.2■□□□□ 0.18
KCNIP1Q9NZI2 GATS-209ENST00000454084 1030 ntTSL 3 BASIC16.2■□□□□ 0.18
KCNIP1Q9NZI2 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC16.2■□□□□ 0.18
KCNIP1Q9NZI2 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC16.2■□□□□ 0.18
KCNIP1Q9NZI2 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC16.2■□□□□ 0.18
KCNIP1Q9NZI2 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
KCNIP1Q9NZI2 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC16.2■□□□□ 0.18
KCNIP1Q9NZI2 HLA-B-256ENST00000639848 1089 ntBASIC16.2■□□□□ 0.18
KCNIP1Q9NZI2 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
KCNIP1Q9NZI2 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC16.2■□□□□ 0.18
KCNIP1Q9NZI2 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
KCNIP1Q9NZI2 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
KCNIP1Q9NZI2 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
KCNIP1Q9NZI2 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
KCNIP1Q9NZI2 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
KCNIP1Q9NZI2 AP006587.1-201ENST00000534129 1502 ntBASIC16.19■□□□□ 0.18
KCNIP1Q9NZI2 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC16.19■□□□□ 0.18
KCNIP1Q9NZI2 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
KCNIP1Q9NZI2 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
KCNIP1Q9NZI2 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
KCNIP1Q9NZI2 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
KCNIP1Q9NZI2 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
KCNIP1Q9NZI2 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
KCNIP1Q9NZI2 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
KCNIP1Q9NZI2 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC16.19■□□□□ 0.18
KCNIP1Q9NZI2 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
KCNIP1Q9NZI2 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
KCNIP1Q9NZI2 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
KCNIP1Q9NZI2 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC16.19■□□□□ 0.18
KCNIP1Q9NZI2 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC16.19■□□□□ 0.18
KCNIP1Q9NZI2 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
KCNIP1Q9NZI2 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC16.19■□□□□ 0.18
KCNIP1Q9NZI2 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC16.19■□□□□ 0.18
KCNIP1Q9NZI2 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
KCNIP1Q9NZI2 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC16.19■□□□□ 0.18
KCNIP1Q9NZI2 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC16.19■□□□□ 0.18
KCNIP1Q9NZI2 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
KCNIP1Q9NZI2 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC16.19■□□□□ 0.18
KCNIP1Q9NZI2 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
KCNIP1Q9NZI2 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
KCNIP1Q9NZI2 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
KCNIP1Q9NZI2 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC16.19■□□□□ 0.18
KCNIP1Q9NZI2 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
KCNIP1Q9NZI2 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC16.19■□□□□ 0.18
KCNIP1Q9NZI2 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
KCNIP1Q9NZI2 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC16.18■□□□□ 0.18
KCNIP1Q9NZI2 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
KCNIP1Q9NZI2 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC16.18■□□□□ 0.18
KCNIP1Q9NZI2 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC16.18■□□□□ 0.18
KCNIP1Q9NZI2 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
KCNIP1Q9NZI2 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
KCNIP1Q9NZI2 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
KCNIP1Q9NZI2 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
KCNIP1Q9NZI2 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC16.18■□□□□ 0.18
KCNIP1Q9NZI2 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
KCNIP1Q9NZI2 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
KCNIP1Q9NZI2 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
KCNIP1Q9NZI2 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
KCNIP1Q9NZI2 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 19.7 ms