Protein–RNA interactions for Protein: Q9NPP4

NLRC4, NLR family CARD domain-containing protein 4, humanhuman

Predictions only

Length 1,024 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NLRC4Q9NPP4 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
NLRC4Q9NPP4 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
NLRC4Q9NPP4 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
NLRC4Q9NPP4 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC20.91■□□□□ 0.94
NLRC4Q9NPP4 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
NLRC4Q9NPP4 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
NLRC4Q9NPP4 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
NLRC4Q9NPP4 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
NLRC4Q9NPP4 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
NLRC4Q9NPP4 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
NLRC4Q9NPP4 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
NLRC4Q9NPP4 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
NLRC4Q9NPP4 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
NLRC4Q9NPP4 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
NLRC4Q9NPP4 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
NLRC4Q9NPP4 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC20.91■□□□□ 0.94
NLRC4Q9NPP4 ANKRD18DP-204ENST00000455355 1975 ntBASIC20.91■□□□□ 0.94
NLRC4Q9NPP4 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
NLRC4Q9NPP4 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC20.91■□□□□ 0.94
NLRC4Q9NPP4 AC090192.1-201ENST00000517740 490 ntBASIC20.91■□□□□ 0.94
NLRC4Q9NPP4 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC20.91■□□□□ 0.94
NLRC4Q9NPP4 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC20.91■□□□□ 0.94
NLRC4Q9NPP4 AC008687.6-201ENST00000596318 630 ntBASIC20.91■□□□□ 0.94
NLRC4Q9NPP4 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
NLRC4Q9NPP4 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC20.91■□□□□ 0.94
NLRC4Q9NPP4 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
NLRC4Q9NPP4 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
NLRC4Q9NPP4 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
NLRC4Q9NPP4 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC20.9■□□□□ 0.94
NLRC4Q9NPP4 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC20.9■□□□□ 0.94
NLRC4Q9NPP4 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
NLRC4Q9NPP4 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC20.9■□□□□ 0.94
NLRC4Q9NPP4 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
NLRC4Q9NPP4 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC20.9■□□□□ 0.94
NLRC4Q9NPP4 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
NLRC4Q9NPP4 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC20.9■□□□□ 0.94
NLRC4Q9NPP4 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
NLRC4Q9NPP4 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
NLRC4Q9NPP4 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC20.9■□□□□ 0.94
NLRC4Q9NPP4 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
NLRC4Q9NPP4 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC20.9■□□□□ 0.94
NLRC4Q9NPP4 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC20.9■□□□□ 0.94
NLRC4Q9NPP4 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
NLRC4Q9NPP4 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
NLRC4Q9NPP4 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC20.9■□□□□ 0.94
NLRC4Q9NPP4 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC20.9■□□□□ 0.94
NLRC4Q9NPP4 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC20.9■□□□□ 0.94
NLRC4Q9NPP4 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC20.9■□□□□ 0.94
NLRC4Q9NPP4 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC20.9■□□□□ 0.94
NLRC4Q9NPP4 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
NLRC4Q9NPP4 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC20.9■□□□□ 0.94
NLRC4Q9NPP4 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC20.9■□□□□ 0.94
NLRC4Q9NPP4 INO80E-214ENST00000620599 515 ntTSL 2 BASIC20.9■□□□□ 0.94
NLRC4Q9NPP4 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
NLRC4Q9NPP4 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
NLRC4Q9NPP4 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
NLRC4Q9NPP4 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC20.9■□□□□ 0.94
NLRC4Q9NPP4 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC20.9■□□□□ 0.94
NLRC4Q9NPP4 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
NLRC4Q9NPP4 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
NLRC4Q9NPP4 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC20.9■□□□□ 0.94
NLRC4Q9NPP4 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC20.9■□□□□ 0.94
NLRC4Q9NPP4 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
NLRC4Q9NPP4 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC20.9■□□□□ 0.94
NLRC4Q9NPP4 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
NLRC4Q9NPP4 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
NLRC4Q9NPP4 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC20.89■□□□□ 0.94
NLRC4Q9NPP4 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
NLRC4Q9NPP4 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.94
NLRC4Q9NPP4 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
NLRC4Q9NPP4 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
NLRC4Q9NPP4 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC20.89■□□□□ 0.94
NLRC4Q9NPP4 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
NLRC4Q9NPP4 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
NLRC4Q9NPP4 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
NLRC4Q9NPP4 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC20.89■□□□□ 0.93
NLRC4Q9NPP4 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC20.89■□□□□ 0.93
NLRC4Q9NPP4 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
NLRC4Q9NPP4 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC20.89■□□□□ 0.93
NLRC4Q9NPP4 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
NLRC4Q9NPP4 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
NLRC4Q9NPP4 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC20.89■□□□□ 0.93
NLRC4Q9NPP4 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC20.89■□□□□ 0.93
NLRC4Q9NPP4 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
NLRC4Q9NPP4 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC20.88■□□□□ 0.93
NLRC4Q9NPP4 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
NLRC4Q9NPP4 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
NLRC4Q9NPP4 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
NLRC4Q9NPP4 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
NLRC4Q9NPP4 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
NLRC4Q9NPP4 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
NLRC4Q9NPP4 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
NLRC4Q9NPP4 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
NLRC4Q9NPP4 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC20.88■□□□□ 0.93
NLRC4Q9NPP4 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC20.88■□□□□ 0.93
NLRC4Q9NPP4 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC20.88■□□□□ 0.93
NLRC4Q9NPP4 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC20.88■□□□□ 0.93
NLRC4Q9NPP4 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC20.88■□□□□ 0.93
NLRC4Q9NPP4 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC20.88■□□□□ 0.93
NLRC4Q9NPP4 AC142086.2-201ENST00000569753 217 ntBASIC20.88■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 49.9 ms