Protein–RNA interactions for Protein: Q9H0L4

CSTF2T, Cleavage stimulation factor subunit 2 tau variant, humanhuman

Known RBP eCLIP

Length 616 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF2TQ9H0L4 AMDHD2-214ENST00000567475 714 ntTSL 219.27■□□□□ 0.685e-8■■■□□ 18.8
CSTF2TQ9H0L4 AMDHD2-209ENST00000563633 1117 ntTSL 518.59■□□□□ 0.575e-8■■■□□ 18.8
CSTF2TQ9H0L4 AMDHD2-208ENST00000563556 490 ntTSL 418.56■□□□□ 0.565e-8■■■□□ 18.8
CSTF2TQ9H0L4 AMDHD2-217ENST00000569879 924 ntTSL 318.56■□□□□ 0.565e-8■■■□□ 18.8
CSTF2TQ9H0L4 AMDHD2-216ENST00000569219 735 ntTSL 216.51■□□□□ 0.235e-8■■■□□ 18.8
CSTF2TQ9H0L4 ATP1A1-204ENST00000418797 654 ntTSL 318.8■□□□□ 0.64e-7■■■□□ 18.8
CSTF2TQ9H0L4 ATP1A1-208ENST00000488733 1728 ntTSL 217.88■□□□□ 0.454e-7■■■□□ 18.8
CSTF2TQ9H0L4 ATP1A1-201ENST00000295598 3654 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.554e-7■■■□□ 18.8
CSTF2TQ9H0L4 CAPRIN2-213ENST00000542550 770 ntTSL 324.68■■□□□ 1.543e-17■■■□□ 18.8
CSTF2TQ9H0L4 CAPRIN2-211ENST00000540584 569 ntTSL 421.52■■□□□ 1.043e-17■■■□□ 18.8
CSTF2TQ9H0L4 CAPRIN2-212ENST00000541765 630 ntTSL 520.39■□□□□ 0.853e-17■■■□□ 18.8
CSTF2TQ9H0L4 CAPRIN2-210ENST00000540436 557 ntTSL 318.89■□□□□ 0.613e-17■■■□□ 18.8
CSTF2TQ9H0L4 CAPRIN2-207ENST00000537108 2187 ntTSL 57.01□□□□□ -1.293e-17■■■□□ 18.8
CSTF2TQ9H0L4 KLHDC4-218ENST00000567298 4572 ntTSL 514.22□□□□□ -0.137e-7■■■□□ 18.8
CSTF2TQ9H0L4 PFKL-208ENST00000491298 819 ntTSL 513.9□□□□□ -0.181e-7■■■□□ 18.8
CSTF2TQ9H0L4 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC18.8■□□□□ 0.69e-7■■■□□ 18.8
CSTF2TQ9H0L4 AC110285.2-202ENST00000608155 414 ntTSL 515.36■□□□□ 0.059e-7■■■□□ 18.8
CSTF2TQ9H0L4 PPARGC1B-206ENST00000461780 566 ntTSL 414.36□□□□□ -0.112e-6■■■□□ 18.8
CSTF2TQ9H0L4 PPARGC1B-203ENST00000394320 4803 ntTSL 1 (best) BASIC13.74□□□□□ -0.212e-6■■■□□ 18.8
CSTF2TQ9H0L4 PPARGC1B-202ENST00000360453 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.412e-6■■■□□ 18.8
CSTF2TQ9H0L4 PPARGC1B-201ENST00000309241 10568 ntAPPRIS P3 TSL 1 (best) BASIC8.16□□□□□ -1.12e-6■■■□□ 18.8
CSTF2TQ9H0L4 C22orf34-204ENST00000414287 2197 ntTSL 1 (best) BASIC14.13□□□□□ -0.154e-7■■■□□ 18.8
CSTF2TQ9H0L4 C22orf34-205ENST00000416411 542 ntTSL 412.76□□□□□ -0.374e-7■■■□□ 18.8
CSTF2TQ9H0L4 PACS2-214ENST00000552138 765 ntTSL 213.32□□□□□ -0.281e-6■■■□□ 18.8
CSTF2TQ9H0L4 GFPT1-201ENST00000357308 8703 ntTSL 5 BASIC8.15□□□□□ -1.117e-18■■■□□ 18.8
CSTF2TQ9H0L4 GFPT1-204ENST00000494201 625 ntTSL 56.7□□□□□ -1.347e-18■■■□□ 18.8
CSTF2TQ9H0L4 GFPT1-202ENST00000361060 8632 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.377e-18■■■□□ 18.8
CSTF2TQ9H0L4 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC19.65■□□□□ 0.743e-7■■■□□ 18.8
CSTF2TQ9H0L4 ZFYVE9-204ENST00000371591 4874 ntAPPRIS P4 TSL 1 (best) BASIC8.29□□□□□ -1.083e-7■■■□□ 18.8
CSTF2TQ9H0L4 ZFYVE9-202ENST00000357206 4567 ntAPPRIS ALT1 TSL 1 (best) BASIC5.77□□□□□ -1.493e-7■■■□□ 18.8
CSTF2TQ9H0L4 TNFRSF12A-207ENST00000575836 161 ntTSL 314.34□□□□□ -0.116e-7■■■□□ 18.8
CSTF2TQ9H0L4 NCAM2-202ENST00000400546 8135 ntAPPRIS P2 TSL 1 (best) BASIC8.49□□□□□ -1.053e-9■■■□□ 18.8
CSTF2TQ9H0L4 ADAP1-204ENST00000446141 2085 ntTSL 217.34■□□□□ 0.371e-6■■■□□ 18.8
CSTF2TQ9H0L4 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC17.34■□□□□ 0.371e-6■■■□□ 18.8
CSTF2TQ9H0L4 ADAP1-207ENST00000453823 560 ntTSL 412.14□□□□□ -0.471e-6■■■□□ 18.8
CSTF2TQ9H0L4 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC18.06■□□□□ 0.487e-8■■■□□ 18.8
CSTF2TQ9H0L4 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC17.35■□□□□ 0.377e-8■■■□□ 18.8
CSTF2TQ9H0L4 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC16.44■□□□□ 0.227e-8■■■□□ 18.8
CSTF2TQ9H0L4 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC15.36■□□□□ 0.057e-8■■■□□ 18.8
CSTF2TQ9H0L4 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC15.09■□□□□ 0.017e-8■■■□□ 18.8
CSTF2TQ9H0L4 WBP2-203ENST00000433525 928 ntTSL 2 BASIC15.01□□□□□ -0.017e-8■■■□□ 18.8
CSTF2TQ9H0L4 WBP2-208ENST00000588373 1374 ntTSL 214.84□□□□□ -0.037e-8■■■□□ 18.8
CSTF2TQ9H0L4 WBP2-211ENST00000589642 568 ntTSL 314.53□□□□□ -0.087e-8■■■□□ 18.8
CSTF2TQ9H0L4 WBP2-214ENST00000590450 573 ntTSL 413.1□□□□□ -0.317e-8■■■□□ 18.8
CSTF2TQ9H0L4 WBP2-216ENST00000591831 1406 ntTSL 512.33□□□□□ -0.447e-8■■■□□ 18.8
CSTF2TQ9H0L4 WBP2-202ENST00000416574 987 ntTSL 212.27□□□□□ -0.457e-8■■■□□ 18.8
CSTF2TQ9H0L4 WBP2-212ENST00000589834 591 ntTSL 211.56□□□□□ -0.567e-8■■■□□ 18.8
CSTF2TQ9H0L4 WBP2-210ENST00000589241 557 ntTSL 211.14□□□□□ -0.637e-8■■■□□ 18.8
CSTF2TQ9H0L4 WBP2-206ENST00000587374 480 ntTSL 411.11□□□□□ -0.637e-8■■■□□ 18.8
CSTF2TQ9H0L4 WBP2-218ENST00000593002 610 ntTSL 410.45□□□□□ -0.747e-8■■■□□ 18.8
CSTF2TQ9H0L4 WBP2-217ENST00000592802 574 ntTSL 29.13□□□□□ -0.957e-8■■■□□ 18.8
CSTF2TQ9H0L4 ERICH1-206ENST00000522706 1551 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.431e-6■■■□□ 18.8
CSTF2TQ9H0L4 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.884e-7■■■□□ 18.8
CSTF2TQ9H0L4 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.284e-7■■■□□ 18.8
CSTF2TQ9H0L4 RPL8-206ENST00000528296 540 ntTSL 316.19■□□□□ 0.184e-7■■■□□ 18.8
CSTF2TQ9H0L4 RPL8-209ENST00000529920 876 ntTSL 215.97■□□□□ 0.154e-7■■■□□ 18.8
CSTF2TQ9H0L4 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.094e-7■■■□□ 18.8
CSTF2TQ9H0L4 RPL8-213ENST00000533397 730 ntTSL 215.46■□□□□ 0.074e-7■■■□□ 18.8
CSTF2TQ9H0L4 RPL8-204ENST00000526668 717 ntTSL 1 (best)14.88□□□□□ -0.034e-7■■■□□ 18.8
CSTF2TQ9H0L4 RPL8-212ENST00000532702 745 ntTSL 214.33□□□□□ -0.124e-7■■■□□ 18.8
CSTF2TQ9H0L4 RPL8-205ENST00000527914 551 ntTSL 3 BASIC14.22□□□□□ -0.134e-7■■■□□ 18.8
CSTF2TQ9H0L4 RPL8-211ENST00000531975 698 ntTSL 311.6□□□□□ -0.554e-7■■■□□ 18.8
CSTF2TQ9H0L4 RPL8-208ENST00000529163 556 ntTSL 210.74□□□□□ -0.694e-7■■■□□ 18.8
CSTF2TQ9H0L4 FAM76B-211ENST00000543641 1379 ntTSL 1 (best)24.8■■□□□ 1.567e-7■■■□□ 18.7
CSTF2TQ9H0L4 FAM76B-212ENST00000545654 2001 ntTSL 222.65■■□□□ 1.227e-7■■■□□ 18.7
CSTF2TQ9H0L4 FAM76B-207ENST00000538316 585 ntTSL 521.49■■□□□ 1.037e-7■■■□□ 18.7
CSTF2TQ9H0L4 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC17.65■□□□□ 0.427e-7■■■□□ 18.7
CSTF2TQ9H0L4 FAM76B-210ENST00000542135 610 ntTSL 215.62■□□□□ 0.097e-7■■■□□ 18.7
CSTF2TQ9H0L4 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.037e-7■■■□□ 18.7
CSTF2TQ9H0L4 FAM76B-202ENST00000398187 3823 ntTSL 1 (best)15.11■□□□□ 0.017e-7■■■□□ 18.7
CSTF2TQ9H0L4 FAM76B-208ENST00000540054 730 ntTSL 213.35□□□□□ -0.277e-7■■■□□ 18.7
CSTF2TQ9H0L4 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC17.72■□□□□ 0.437e-7■■■□□ 18.7
CSTF2TQ9H0L4 NFE2L1-205ENST00000577411 562 ntTSL 516.87■□□□□ 0.295e-7■■■□□ 18.7
CSTF2TQ9H0L4 NFE2L1-211ENST00000580050 476 ntTSL 416.87■□□□□ 0.297e-7■■■□□ 18.7
CSTF2TQ9H0L4 NFE2L1-220ENST00000584634 588 ntTSL 416.79■□□□□ 0.287e-7■■■□□ 18.7
CSTF2TQ9H0L4 NFE2L1-217ENST00000583210 512 ntTSL 414.71□□□□□ -0.055e-7■■■□□ 18.7
CSTF2TQ9H0L4 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC13.87□□□□□ -0.197e-7■■■□□ 18.7
CSTF2TQ9H0L4 NFE2L1-218ENST00000583378 2051 ntTSL 5 BASIC13.04□□□□□ -0.327e-7■■■□□ 18.7
CSTF2TQ9H0L4 NFE2L1-208ENST00000579537 372 ntTSL 411.45□□□□□ -0.585e-7■■■□□ 18.7
CSTF2TQ9H0L4 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.851e-6■■■□□ 18.7
CSTF2TQ9H0L4 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.531e-6■■■□□ 18.7
CSTF2TQ9H0L4 KLHDC4-207ENST00000562155 1757 ntTSL 518.1■□□□□ 0.491e-6■■■□□ 18.7
CSTF2TQ9H0L4 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.451e-6■■■□□ 18.7
CSTF2TQ9H0L4 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC17.84■□□□□ 0.451e-6■■■□□ 18.7
CSTF2TQ9H0L4 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC17.24■□□□□ 0.351e-6■■■□□ 18.7
CSTF2TQ9H0L4 KLHDC4-202ENST00000316853 1287 ntTSL 1 (best)16.98■□□□□ 0.311e-6■■■□□ 18.7
CSTF2TQ9H0L4 KLHDC4-217ENST00000566661 2232 ntTSL 516.15■□□□□ 0.181e-6■■■□□ 18.7
CSTF2TQ9H0L4 KLHDC4-208ENST00000562261 1065 ntTSL 314.33□□□□□ -0.121e-6■■■□□ 18.7
CSTF2TQ9H0L4 MAD1L1-212ENST00000450235 850 ntTSL 316.11■□□□□ 0.178e-7■■■□□ 18.7
CSTF2TQ9H0L4 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC17.76■□□□□ 0.435e-7■■■□□ 18.7
CSTF2TQ9H0L4 HERPUD1-219ENST00000570273 1425 ntTSL 1 (best)14.07□□□□□ -0.162e-8■■■□□ 18.7
CSTF2TQ9H0L4 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC14.04□□□□□ -0.162e-8■■■□□ 18.7
CSTF2TQ9H0L4 HERPUD1-210ENST00000565966 798 ntTSL 512.91□□□□□ -0.342e-8■■■□□ 18.7
CSTF2TQ9H0L4 HERPUD1-218ENST00000569569 1125 ntTSL 212.91□□□□□ -0.342e-8■■■□□ 18.7
CSTF2TQ9H0L4 HERPUD1-203ENST00000379792 1782 ntTSL 5 BASIC12.87□□□□□ -0.352e-8■■■□□ 18.7
CSTF2TQ9H0L4 HERPUD1-204ENST00000439977 2946 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.432e-8■■■□□ 18.7
CSTF2TQ9H0L4 HERPUD1-202ENST00000344114 1388 ntTSL 1 (best) BASIC12.2□□□□□ -0.462e-8■■■□□ 18.7
CSTF2TQ9H0L4 HERPUD1-208ENST00000563911 844 ntTSL 38.18□□□□□ -1.12e-8■■■□□ 18.7
CSTF2TQ9H0L4 HERPUD1-206ENST00000563343 567 ntTSL 47.38□□□□□ -1.232e-8■■■□□ 18.7
CSTF2TQ9H0L4 HERPUD1-209ENST00000564678 2199 ntTSL 1 (best)6.78□□□□□ -1.322e-8■■■□□ 18.7
Retrieved 100 of 19,151 protein–RNA pairs in 151.2 ms