Protein–RNA interactions for Protein: Q99728

BARD1, BRCA1-associated RING domain protein 1, humanhuman

Known RBP Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BARD1Q99728 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
BARD1Q99728 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
BARD1Q99728 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
BARD1Q99728 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC18.46■□□□□ 0.55
BARD1Q99728 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
BARD1Q99728 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
BARD1Q99728 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC18.46■□□□□ 0.55
BARD1Q99728 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
BARD1Q99728 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
BARD1Q99728 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC18.46■□□□□ 0.55
BARD1Q99728 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC18.46■□□□□ 0.55
BARD1Q99728 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
BARD1Q99728 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
BARD1Q99728 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC18.46■□□□□ 0.55
BARD1Q99728 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
BARD1Q99728 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
BARD1Q99728 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC18.46■□□□□ 0.55
BARD1Q99728 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
BARD1Q99728 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC18.46■□□□□ 0.55
BARD1Q99728 AC239809.2-201ENST00000415381 517 ntBASIC18.46■□□□□ 0.55
BARD1Q99728 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
BARD1Q99728 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
BARD1Q99728 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC18.46■□□□□ 0.55
BARD1Q99728 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC18.46■□□□□ 0.55
BARD1Q99728 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC18.46■□□□□ 0.55
BARD1Q99728 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
BARD1Q99728 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC18.46■□□□□ 0.55
BARD1Q99728 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
BARD1Q99728 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
BARD1Q99728 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
BARD1Q99728 CD37-204ENST00000535669 1674 ntTSL 2 BASIC18.46■□□□□ 0.55
BARD1Q99728 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
BARD1Q99728 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
BARD1Q99728 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
BARD1Q99728 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC18.46■□□□□ 0.55
BARD1Q99728 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
BARD1Q99728 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
BARD1Q99728 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
BARD1Q99728 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC18.46■□□□□ 0.54
BARD1Q99728 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC18.46■□□□□ 0.54
BARD1Q99728 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC18.45■□□□□ 0.54
BARD1Q99728 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
BARD1Q99728 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
BARD1Q99728 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
BARD1Q99728 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC18.45■□□□□ 0.54
BARD1Q99728 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
BARD1Q99728 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
BARD1Q99728 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
BARD1Q99728 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
BARD1Q99728 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC18.45■□□□□ 0.54
BARD1Q99728 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC18.45■□□□□ 0.54
BARD1Q99728 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC18.45■□□□□ 0.54
BARD1Q99728 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
BARD1Q99728 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
BARD1Q99728 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
BARD1Q99728 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC18.45■□□□□ 0.54
BARD1Q99728 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC18.45■□□□□ 0.54
BARD1Q99728 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC18.45■□□□□ 0.54
BARD1Q99728 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC18.45■□□□□ 0.54
BARD1Q99728 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
BARD1Q99728 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
BARD1Q99728 SNX21-213ENST00000614929 587 ntTSL 5 BASIC18.45■□□□□ 0.54
BARD1Q99728 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC18.45■□□□□ 0.54
BARD1Q99728 AC113410.3-201ENST00000623366 203 ntBASIC18.45■□□□□ 0.54
BARD1Q99728 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
BARD1Q99728 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
BARD1Q99728 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
BARD1Q99728 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
BARD1Q99728 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
BARD1Q99728 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC18.45■□□□□ 0.54
BARD1Q99728 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC18.45■□□□□ 0.54
BARD1Q99728 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
BARD1Q99728 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
BARD1Q99728 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC18.45■□□□□ 0.54
BARD1Q99728 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC18.45■□□□□ 0.54
BARD1Q99728 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
BARD1Q99728 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
BARD1Q99728 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
BARD1Q99728 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
BARD1Q99728 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
BARD1Q99728 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC18.44■□□□□ 0.54
BARD1Q99728 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
BARD1Q99728 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC18.44■□□□□ 0.54
BARD1Q99728 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC18.44■□□□□ 0.54
BARD1Q99728 AC087499.1-201ENST00000418141 1075 ntBASIC18.44■□□□□ 0.54
BARD1Q99728 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC18.44■□□□□ 0.54
BARD1Q99728 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
BARD1Q99728 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC18.44■□□□□ 0.54
BARD1Q99728 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC18.44■□□□□ 0.54
BARD1Q99728 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
BARD1Q99728 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC18.44■□□□□ 0.54
BARD1Q99728 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
BARD1Q99728 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
BARD1Q99728 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
BARD1Q99728 STK25-204ENST00000405585 1643 ntTSL 2 BASIC18.44■□□□□ 0.54
BARD1Q99728 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC18.44■□□□□ 0.54
BARD1Q99728 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
BARD1Q99728 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
BARD1Q99728 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
BARD1Q99728 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 74.7 ms