Protein–RNA interactions for Protein: Q96EA4

SPDL1, Protein Spindly, humanhuman

Predictions only

Length 605 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPDL1Q96EA4 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
SPDL1Q96EA4 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
SPDL1Q96EA4 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
SPDL1Q96EA4 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
SPDL1Q96EA4 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC19■□□□□ 0.63
SPDL1Q96EA4 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
SPDL1Q96EA4 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
SPDL1Q96EA4 PTGES2-AS1-201ENST00000443493 2100 ntBASIC19■□□□□ 0.63
SPDL1Q96EA4 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC19■□□□□ 0.63
SPDL1Q96EA4 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
SPDL1Q96EA4 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC19■□□□□ 0.63
SPDL1Q96EA4 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC19■□□□□ 0.63
SPDL1Q96EA4 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC19■□□□□ 0.63
SPDL1Q96EA4 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
SPDL1Q96EA4 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
SPDL1Q96EA4 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
SPDL1Q96EA4 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC18.99■□□□□ 0.63
SPDL1Q96EA4 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC18.99■□□□□ 0.63
SPDL1Q96EA4 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC18.99■□□□□ 0.63
SPDL1Q96EA4 AC009113.1-201ENST00000570267 2443 ntBASIC18.99■□□□□ 0.63
SPDL1Q96EA4 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
SPDL1Q96EA4 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
SPDL1Q96EA4 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
SPDL1Q96EA4 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
SPDL1Q96EA4 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
SPDL1Q96EA4 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC18.99■□□□□ 0.63
SPDL1Q96EA4 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC18.99■□□□□ 0.63
SPDL1Q96EA4 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
SPDL1Q96EA4 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC18.99■□□□□ 0.63
SPDL1Q96EA4 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC18.99■□□□□ 0.63
SPDL1Q96EA4 MYCNOS-205ENST00000641950 531 ntBASIC18.99■□□□□ 0.63
SPDL1Q96EA4 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC18.99■□□□□ 0.63
SPDL1Q96EA4 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
SPDL1Q96EA4 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
SPDL1Q96EA4 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
SPDL1Q96EA4 AC068880.1-201ENST00000507289 2297 ntBASIC18.99■□□□□ 0.63
SPDL1Q96EA4 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
SPDL1Q96EA4 HTR7P1-202ENST00000624664 4411 ntBASIC18.99■□□□□ 0.63
SPDL1Q96EA4 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC18.98■□□□□ 0.63
SPDL1Q96EA4 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
SPDL1Q96EA4 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC18.98■□□□□ 0.63
SPDL1Q96EA4 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
SPDL1Q96EA4 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
SPDL1Q96EA4 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC18.98■□□□□ 0.63
SPDL1Q96EA4 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
SPDL1Q96EA4 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
SPDL1Q96EA4 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
SPDL1Q96EA4 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC18.98■□□□□ 0.63
SPDL1Q96EA4 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
SPDL1Q96EA4 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC18.98■□□□□ 0.63
SPDL1Q96EA4 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
SPDL1Q96EA4 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC18.98■□□□□ 0.63
SPDL1Q96EA4 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC18.98■□□□□ 0.63
SPDL1Q96EA4 AL591742.1-201ENST00000604433 565 ntBASIC18.98■□□□□ 0.63
SPDL1Q96EA4 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
SPDL1Q96EA4 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC18.98■□□□□ 0.63
SPDL1Q96EA4 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
SPDL1Q96EA4 TP73-202ENST00000354437 2140 ntTSL 5 BASIC18.98■□□□□ 0.63
SPDL1Q96EA4 KRT8P17-201ENST00000453110 1448 ntBASIC18.98■□□□□ 0.63
SPDL1Q96EA4 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
SPDL1Q96EA4 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
SPDL1Q96EA4 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
SPDL1Q96EA4 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC18.98■□□□□ 0.63
SPDL1Q96EA4 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC18.98■□□□□ 0.63
SPDL1Q96EA4 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC18.98■□□□□ 0.63
SPDL1Q96EA4 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
SPDL1Q96EA4 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SPDL1Q96EA4 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
SPDL1Q96EA4 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC18.97■□□□□ 0.63
SPDL1Q96EA4 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SPDL1Q96EA4 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SPDL1Q96EA4 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SPDL1Q96EA4 GALNS-213ENST00000569433 723 ntTSL 3 BASIC18.97■□□□□ 0.63
SPDL1Q96EA4 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SPDL1Q96EA4 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SPDL1Q96EA4 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
SPDL1Q96EA4 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SPDL1Q96EA4 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC18.97■□□□□ 0.63
SPDL1Q96EA4 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SPDL1Q96EA4 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC18.97■□□□□ 0.63
SPDL1Q96EA4 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SPDL1Q96EA4 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
SPDL1Q96EA4 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
SPDL1Q96EA4 EML3-216ENST00000529309 2909 ntTSL 2 BASIC18.97■□□□□ 0.63
SPDL1Q96EA4 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC18.97■□□□□ 0.63
SPDL1Q96EA4 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
SPDL1Q96EA4 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
SPDL1Q96EA4 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
SPDL1Q96EA4 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC18.96■□□□□ 0.63
SPDL1Q96EA4 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
SPDL1Q96EA4 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SPDL1Q96EA4 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC18.96■□□□□ 0.63
SPDL1Q96EA4 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
SPDL1Q96EA4 PARP1-202ENST00000366792 553 ntTSL 3 BASIC18.96■□□□□ 0.63
SPDL1Q96EA4 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
SPDL1Q96EA4 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC18.96■□□□□ 0.63
SPDL1Q96EA4 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
SPDL1Q96EA4 KRT16P6-202ENST00000425692 1426 ntBASIC18.96■□□□□ 0.63
SPDL1Q96EA4 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
SPDL1Q96EA4 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 46 ms