Protein–RNA interactions for Protein: Q92623

TTC9, Tetratricopeptide repeat protein 9A, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC9Q92623 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TTC9Q92623 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TTC9Q92623 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC18.38■□□□□ 0.53
TTC9Q92623 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC18.38■□□□□ 0.53
TTC9Q92623 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
TTC9Q92623 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
TTC9Q92623 PPP1R14BP5-201ENST00000440334 435 ntBASIC18.38■□□□□ 0.53
TTC9Q92623 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC18.38■□□□□ 0.53
TTC9Q92623 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
TTC9Q92623 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC18.38■□□□□ 0.53
TTC9Q92623 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC18.38■□□□□ 0.53
TTC9Q92623 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TTC9Q92623 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TTC9Q92623 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TTC9Q92623 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
TTC9Q92623 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TTC9Q92623 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC18.38■□□□□ 0.53
TTC9Q92623 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TTC9Q92623 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TTC9Q92623 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
TTC9Q92623 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
TTC9Q92623 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TTC9Q92623 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
TTC9Q92623 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
TTC9Q92623 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC18.37■□□□□ 0.53
TTC9Q92623 HMGA1P5-201ENST00000412453 271 ntBASIC18.37■□□□□ 0.53
TTC9Q92623 PCED1CP-201ENST00000419887 785 ntBASIC18.37■□□□□ 0.53
TTC9Q92623 B3GAT3P1-201ENST00000471720 806 ntBASIC18.37■□□□□ 0.53
TTC9Q92623 FAM86EP-206ENST00000510506 987 ntBASIC18.37■□□□□ 0.53
TTC9Q92623 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC18.37■□□□□ 0.53
TTC9Q92623 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC18.37■□□□□ 0.53
TTC9Q92623 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC18.37■□□□□ 0.53
TTC9Q92623 AL138966.2-201ENST00000621997 464 ntBASIC18.37■□□□□ 0.53
TTC9Q92623 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
TTC9Q92623 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC18.37■□□□□ 0.53
TTC9Q92623 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
TTC9Q92623 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC18.37■□□□□ 0.53
TTC9Q92623 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC18.37■□□□□ 0.53
TTC9Q92623 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TTC9Q92623 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
TTC9Q92623 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
TTC9Q92623 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
TTC9Q92623 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
TTC9Q92623 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
TTC9Q92623 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
TTC9Q92623 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC18.37■□□□□ 0.53
TTC9Q92623 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TTC9Q92623 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TTC9Q92623 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
TTC9Q92623 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC18.36■□□□□ 0.53
TTC9Q92623 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
TTC9Q92623 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
TTC9Q92623 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC18.36■□□□□ 0.53
TTC9Q92623 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
TTC9Q92623 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
TTC9Q92623 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
TTC9Q92623 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
TTC9Q92623 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
TTC9Q92623 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
TTC9Q92623 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC18.36■□□□□ 0.53
TTC9Q92623 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC18.36■□□□□ 0.53
TTC9Q92623 TSPY5P-201ENST00000426936 936 ntBASIC18.36■□□□□ 0.53
TTC9Q92623 FAM207BP-201ENST00000447172 505 ntBASIC18.36■□□□□ 0.53
TTC9Q92623 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
TTC9Q92623 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
TTC9Q92623 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
TTC9Q92623 SMG8-203ENST00000578922 2178 ntBASIC18.36■□□□□ 0.53
TTC9Q92623 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
TTC9Q92623 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC18.36■□□□□ 0.53
TTC9Q92623 AL121956.5-201ENST00000625261 221 ntBASIC18.36■□□□□ 0.53
TTC9Q92623 ABBA01031674.1-201ENST00000635145 728 ntBASIC18.36■□□□□ 0.53
TTC9Q92623 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
TTC9Q92623 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
TTC9Q92623 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
TTC9Q92623 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TTC9Q92623 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
TTC9Q92623 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC18.35■□□□□ 0.53
TTC9Q92623 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TTC9Q92623 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC18.35■□□□□ 0.53
TTC9Q92623 KRT16P6-202ENST00000425692 1426 ntBASIC18.35■□□□□ 0.53
TTC9Q92623 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
TTC9Q92623 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
TTC9Q92623 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
TTC9Q92623 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
TTC9Q92623 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC18.35■□□□□ 0.53
TTC9Q92623 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
TTC9Q92623 YBX1P2-201ENST00000489612 999 ntBASIC18.35■□□□□ 0.53
TTC9Q92623 AC097488.1-201ENST00000507834 756 ntBASIC18.35■□□□□ 0.53
TTC9Q92623 CD320-202ENST00000537716 1119 ntTSL 2 BASIC18.35■□□□□ 0.53
TTC9Q92623 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC18.35■□□□□ 0.53
TTC9Q92623 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC18.35■□□□□ 0.53
TTC9Q92623 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC18.35■□□□□ 0.53
TTC9Q92623 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC18.35■□□□□ 0.53
TTC9Q92623 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
TTC9Q92623 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
TTC9Q92623 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
TTC9Q92623 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC18.35■□□□□ 0.53
TTC9Q92623 AC087289.5-201ENST00000586076 3175 ntBASIC18.35■□□□□ 0.53
TTC9Q92623 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC18.35■□□□□ 0.53
TTC9Q92623 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC18.35■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 23 ms