Protein–RNA interactions for Protein: Q8WUE5

CT55, Cancer/testis antigen 55, humanhuman

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CT55Q8WUE5 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC18■□□□□ 0.47
CT55Q8WUE5 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC18■□□□□ 0.47
CT55Q8WUE5 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC18■□□□□ 0.47
CT55Q8WUE5 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
CT55Q8WUE5 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC18■□□□□ 0.47
CT55Q8WUE5 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC18■□□□□ 0.47
CT55Q8WUE5 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CT55Q8WUE5 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC18■□□□□ 0.47
CT55Q8WUE5 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC18■□□□□ 0.47
CT55Q8WUE5 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
CT55Q8WUE5 AC099778.1-201ENST00000568593 1911 ntBASIC18■□□□□ 0.47
CT55Q8WUE5 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CT55Q8WUE5 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
CT55Q8WUE5 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC17.99■□□□□ 0.47
CT55Q8WUE5 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC17.99■□□□□ 0.47
CT55Q8WUE5 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC17.99■□□□□ 0.47
CT55Q8WUE5 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CT55Q8WUE5 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
CT55Q8WUE5 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC17.99■□□□□ 0.47
CT55Q8WUE5 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
CT55Q8WUE5 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CT55Q8WUE5 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC17.99■□□□□ 0.47
CT55Q8WUE5 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC17.99■□□□□ 0.47
CT55Q8WUE5 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC17.99■□□□□ 0.47
CT55Q8WUE5 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC17.99■□□□□ 0.47
CT55Q8WUE5 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC17.99■□□□□ 0.47
CT55Q8WUE5 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC17.99■□□□□ 0.47
CT55Q8WUE5 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
CT55Q8WUE5 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC17.99■□□□□ 0.47
CT55Q8WUE5 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CT55Q8WUE5 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC17.99■□□□□ 0.47
CT55Q8WUE5 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
CT55Q8WUE5 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
CT55Q8WUE5 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC17.99■□□□□ 0.47
CT55Q8WUE5 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CT55Q8WUE5 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CT55Q8WUE5 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC17.99■□□□□ 0.47
CT55Q8WUE5 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
CT55Q8WUE5 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
CT55Q8WUE5 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CT55Q8WUE5 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
CT55Q8WUE5 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CT55Q8WUE5 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC17.98■□□□□ 0.47
CT55Q8WUE5 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CT55Q8WUE5 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC17.98■□□□□ 0.47
CT55Q8WUE5 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC17.98■□□□□ 0.47
CT55Q8WUE5 USF2-205ENST00000594064 1179 ntTSL 2 BASIC17.98■□□□□ 0.47
CT55Q8WUE5 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
CT55Q8WUE5 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CT55Q8WUE5 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CT55Q8WUE5 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CT55Q8WUE5 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CT55Q8WUE5 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
CT55Q8WUE5 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CT55Q8WUE5 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CT55Q8WUE5 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC17.98■□□□□ 0.47
CT55Q8WUE5 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CT55Q8WUE5 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CT55Q8WUE5 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
CT55Q8WUE5 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CT55Q8WUE5 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
CT55Q8WUE5 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
CT55Q8WUE5 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CT55Q8WUE5 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CT55Q8WUE5 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC17.97■□□□□ 0.47
CT55Q8WUE5 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC17.97■□□□□ 0.47
CT55Q8WUE5 Telomerase-vert.1-201ENST00000363312 438 ntBASIC17.97■□□□□ 0.47
CT55Q8WUE5 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC17.97■□□□□ 0.47
CT55Q8WUE5 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC17.97■□□□□ 0.47
CT55Q8WUE5 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
CT55Q8WUE5 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
CT55Q8WUE5 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC17.97■□□□□ 0.47
CT55Q8WUE5 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC17.97■□□□□ 0.47
CT55Q8WUE5 CD320-202ENST00000537716 1119 ntTSL 2 BASIC17.97■□□□□ 0.47
CT55Q8WUE5 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC17.97■□□□□ 0.47
CT55Q8WUE5 ETFA-216ENST00000560726 942 ntTSL 3 BASIC17.97■□□□□ 0.47
CT55Q8WUE5 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC17.97■□□□□ 0.47
CT55Q8WUE5 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC17.97■□□□□ 0.47
CT55Q8WUE5 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC17.97■□□□□ 0.47
CT55Q8WUE5 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC17.97■□□□□ 0.47
CT55Q8WUE5 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC17.97■□□□□ 0.47
CT55Q8WUE5 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CT55Q8WUE5 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
CT55Q8WUE5 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
CT55Q8WUE5 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
CT55Q8WUE5 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CT55Q8WUE5 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
CT55Q8WUE5 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
CT55Q8WUE5 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC17.96■□□□□ 0.47
CT55Q8WUE5 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CT55Q8WUE5 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
CT55Q8WUE5 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CT55Q8WUE5 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CT55Q8WUE5 PHB2-202ENST00000440277 996 ntTSL 5 BASIC17.96■□□□□ 0.47
CT55Q8WUE5 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CT55Q8WUE5 AL671277.2-201ENST00000458060 996 ntBASIC17.96■□□□□ 0.47
CT55Q8WUE5 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CT55Q8WUE5 NMU-205ENST00000511469 756 ntTSL 3 BASIC17.96■□□□□ 0.47
CT55Q8WUE5 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
CT55Q8WUE5 DBP-204ENST00000599385 709 ntTSL 3 BASIC17.96■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 50.2 ms