Protein–RNA interactions for Protein: Q8N7H5

PAF1, RNA polymerase II-associated factor 1 homolog, humanhuman

Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PAF1Q8N7H5 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
PAF1Q8N7H5 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.77
PAF1Q8N7H5 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
PAF1Q8N7H5 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC19.83■□□□□ 0.77
PAF1Q8N7H5 YBX1P10-201ENST00000444752 975 ntBASIC19.83■□□□□ 0.77
PAF1Q8N7H5 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC19.83■□□□□ 0.77
PAF1Q8N7H5 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC19.83■□□□□ 0.77
PAF1Q8N7H5 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC19.83■□□□□ 0.77
PAF1Q8N7H5 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC19.83■□□□□ 0.77
PAF1Q8N7H5 DET1-205ENST00000558413 583 ntTSL 4 BASIC19.83■□□□□ 0.77
PAF1Q8N7H5 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC19.83■□□□□ 0.76
PAF1Q8N7H5 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.76
PAF1Q8N7H5 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.76
PAF1Q8N7H5 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC19.83■□□□□ 0.76
PAF1Q8N7H5 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
PAF1Q8N7H5 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.76
PAF1Q8N7H5 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
PAF1Q8N7H5 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.76
PAF1Q8N7H5 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
PAF1Q8N7H5 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
PAF1Q8N7H5 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
PAF1Q8N7H5 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
PAF1Q8N7H5 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
PAF1Q8N7H5 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC19.82■□□□□ 0.76
PAF1Q8N7H5 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
PAF1Q8N7H5 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC19.82■□□□□ 0.76
PAF1Q8N7H5 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
PAF1Q8N7H5 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC19.82■□□□□ 0.76
PAF1Q8N7H5 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
PAF1Q8N7H5 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC19.82■□□□□ 0.76
PAF1Q8N7H5 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
PAF1Q8N7H5 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
PAF1Q8N7H5 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
PAF1Q8N7H5 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
PAF1Q8N7H5 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
PAF1Q8N7H5 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
PAF1Q8N7H5 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
PAF1Q8N7H5 AC133681.1-201ENST00000465482 601 ntBASIC19.82■□□□□ 0.76
PAF1Q8N7H5 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
PAF1Q8N7H5 F2R-202ENST00000505600 442 ntTSL 2 BASIC19.82■□□□□ 0.76
PAF1Q8N7H5 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC19.82■□□□□ 0.76
PAF1Q8N7H5 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC19.82■□□□□ 0.76
PAF1Q8N7H5 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC19.82■□□□□ 0.76
PAF1Q8N7H5 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
PAF1Q8N7H5 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC19.82■□□□□ 0.76
PAF1Q8N7H5 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC19.82■□□□□ 0.76
PAF1Q8N7H5 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
PAF1Q8N7H5 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC19.82■□□□□ 0.76
PAF1Q8N7H5 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
PAF1Q8N7H5 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC19.82■□□□□ 0.76
PAF1Q8N7H5 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
PAF1Q8N7H5 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
PAF1Q8N7H5 GOLGA6L3-201ENST00000507199 1679 ntBASIC19.81■□□□□ 0.76
PAF1Q8N7H5 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC19.81■□□□□ 0.76
PAF1Q8N7H5 MME-217ENST00000616757 1315 ntTSL 5 BASIC19.81■□□□□ 0.76
PAF1Q8N7H5 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
PAF1Q8N7H5 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
PAF1Q8N7H5 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
PAF1Q8N7H5 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
PAF1Q8N7H5 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC19.81■□□□□ 0.76
PAF1Q8N7H5 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
PAF1Q8N7H5 TUBB8P6-201ENST00000436895 1288 ntBASIC19.81■□□□□ 0.76
PAF1Q8N7H5 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
PAF1Q8N7H5 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
PAF1Q8N7H5 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC19.81■□□□□ 0.76
PAF1Q8N7H5 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
PAF1Q8N7H5 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
PAF1Q8N7H5 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
PAF1Q8N7H5 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
PAF1Q8N7H5 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
PAF1Q8N7H5 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
PAF1Q8N7H5 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
PAF1Q8N7H5 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC19.8■□□□□ 0.76
PAF1Q8N7H5 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
PAF1Q8N7H5 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC19.8■□□□□ 0.76
PAF1Q8N7H5 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
PAF1Q8N7H5 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
PAF1Q8N7H5 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
PAF1Q8N7H5 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
PAF1Q8N7H5 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
PAF1Q8N7H5 MIR718-201ENST00000390190 70 ntBASIC19.8■□□□□ 0.76
PAF1Q8N7H5 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
PAF1Q8N7H5 KRT16P5-201ENST00000455284 522 ntBASIC19.8■□□□□ 0.76
PAF1Q8N7H5 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
PAF1Q8N7H5 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC19.8■□□□□ 0.76
PAF1Q8N7H5 USP36-216ENST00000589424 970 ntTSL 5 BASIC19.8■□□□□ 0.76
PAF1Q8N7H5 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
PAF1Q8N7H5 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
PAF1Q8N7H5 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC19.8■□□□□ 0.76
PAF1Q8N7H5 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
PAF1Q8N7H5 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
PAF1Q8N7H5 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC19.8■□□□□ 0.76
PAF1Q8N7H5 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
PAF1Q8N7H5 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC19.8■□□□□ 0.76
PAF1Q8N7H5 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
PAF1Q8N7H5 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
PAF1Q8N7H5 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
PAF1Q8N7H5 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
PAF1Q8N7H5 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
PAF1Q8N7H5 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 24.5 ms