Protein–RNA interactions for Protein: Q8N1V8

LINC01561, Uncharacterized protein encoded by LINC01561, humanhuman

Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01561Q8N1V8 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
LINC01561Q8N1V8 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
LINC01561Q8N1V8 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC12.95□□□□□ -0.34
LINC01561Q8N1V8 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
LINC01561Q8N1V8 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
LINC01561Q8N1V8 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
LINC01561Q8N1V8 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
LINC01561Q8N1V8 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
LINC01561Q8N1V8 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
LINC01561Q8N1V8 RER1-204ENST00000378518 522 ntTSL 3 BASIC12.95□□□□□ -0.34
LINC01561Q8N1V8 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
LINC01561Q8N1V8 YBX1P10-201ENST00000444752 975 ntBASIC12.95□□□□□ -0.34
LINC01561Q8N1V8 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC12.95□□□□□ -0.34
LINC01561Q8N1V8 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
LINC01561Q8N1V8 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
LINC01561Q8N1V8 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
LINC01561Q8N1V8 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC12.95□□□□□ -0.34
LINC01561Q8N1V8 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC12.95□□□□□ -0.34
LINC01561Q8N1V8 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
LINC01561Q8N1V8 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
LINC01561Q8N1V8 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
LINC01561Q8N1V8 FZD10-202ENST00000539839 3282 ntBASIC12.95□□□□□ -0.34
LINC01561Q8N1V8 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC12.95□□□□□ -0.34
LINC01561Q8N1V8 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
LINC01561Q8N1V8 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
LINC01561Q8N1V8 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
LINC01561Q8N1V8 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
LINC01561Q8N1V8 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
LINC01561Q8N1V8 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
LINC01561Q8N1V8 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
LINC01561Q8N1V8 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC12.94□□□□□ -0.34
LINC01561Q8N1V8 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
LINC01561Q8N1V8 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
LINC01561Q8N1V8 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
LINC01561Q8N1V8 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC12.94□□□□□ -0.34
LINC01561Q8N1V8 AC104417.2-201ENST00000562989 1793 ntBASIC12.94□□□□□ -0.34
LINC01561Q8N1V8 AC020916.1-201ENST00000587762 1774 ntBASIC12.94□□□□□ -0.34
LINC01561Q8N1V8 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
LINC01561Q8N1V8 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC12.94□□□□□ -0.34
LINC01561Q8N1V8 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
LINC01561Q8N1V8 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
LINC01561Q8N1V8 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
LINC01561Q8N1V8 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
LINC01561Q8N1V8 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
LINC01561Q8N1V8 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC12.94□□□□□ -0.34
LINC01561Q8N1V8 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
LINC01561Q8N1V8 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC12.94□□□□□ -0.34
LINC01561Q8N1V8 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
LINC01561Q8N1V8 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC12.94□□□□□ -0.34
LINC01561Q8N1V8 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
LINC01561Q8N1V8 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC12.94□□□□□ -0.34
LINC01561Q8N1V8 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC12.94□□□□□ -0.34
LINC01561Q8N1V8 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
LINC01561Q8N1V8 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC12.94□□□□□ -0.34
LINC01561Q8N1V8 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC12.94□□□□□ -0.34
LINC01561Q8N1V8 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
LINC01561Q8N1V8 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
LINC01561Q8N1V8 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC12.94□□□□□ -0.34
LINC01561Q8N1V8 AC133552.2-202ENST00000575694 574 ntBASIC12.94□□□□□ -0.34
LINC01561Q8N1V8 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC12.94□□□□□ -0.34
LINC01561Q8N1V8 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC12.94□□□□□ -0.34
LINC01561Q8N1V8 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
LINC01561Q8N1V8 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
LINC01561Q8N1V8 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC12.94□□□□□ -0.34
LINC01561Q8N1V8 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC12.94□□□□□ -0.34
LINC01561Q8N1V8 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC12.94□□□□□ -0.34
LINC01561Q8N1V8 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
LINC01561Q8N1V8 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC12.94□□□□□ -0.34
LINC01561Q8N1V8 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC12.94□□□□□ -0.34
LINC01561Q8N1V8 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
LINC01561Q8N1V8 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC12.94□□□□□ -0.34
LINC01561Q8N1V8 AC090164.3-201ENST00000610780 2143 ntBASIC12.94□□□□□ -0.34
LINC01561Q8N1V8 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
LINC01561Q8N1V8 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
LINC01561Q8N1V8 CRK-204ENST00000574295 1391 ntTSL 5 BASIC12.94□□□□□ -0.34
LINC01561Q8N1V8 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
LINC01561Q8N1V8 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
LINC01561Q8N1V8 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC12.93□□□□□ -0.34
LINC01561Q8N1V8 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
LINC01561Q8N1V8 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
LINC01561Q8N1V8 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
LINC01561Q8N1V8 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
LINC01561Q8N1V8 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
LINC01561Q8N1V8 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
LINC01561Q8N1V8 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
LINC01561Q8N1V8 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC12.93□□□□□ -0.34
LINC01561Q8N1V8 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
LINC01561Q8N1V8 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
LINC01561Q8N1V8 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC12.93□□□□□ -0.34
LINC01561Q8N1V8 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
LINC01561Q8N1V8 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC12.93□□□□□ -0.34
LINC01561Q8N1V8 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
LINC01561Q8N1V8 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
LINC01561Q8N1V8 GGT1-206ENST00000404223 952 ntTSL 2 BASIC12.93□□□□□ -0.34
LINC01561Q8N1V8 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC12.93□□□□□ -0.34
LINC01561Q8N1V8 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC12.93□□□□□ -0.34
LINC01561Q8N1V8 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC12.93□□□□□ -0.34
LINC01561Q8N1V8 KRT18P5-201ENST00000436075 1291 ntBASIC12.93□□□□□ -0.34
LINC01561Q8N1V8 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
LINC01561Q8N1V8 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 20.5 ms