Protein–RNA interactions for Protein: Q6VVB1

NHLRC1, E3 ubiquitin-protein ligase NHLRC1, humanhuman

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC1Q6VVB1 LETM1P2-201ENST00000597330 2178 ntBASIC17.34■□□□□ 0.37
NHLRC1Q6VVB1 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC17.34■□□□□ 0.37
NHLRC1Q6VVB1 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
NHLRC1Q6VVB1 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC17.34■□□□□ 0.37
NHLRC1Q6VVB1 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
NHLRC1Q6VVB1 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
NHLRC1Q6VVB1 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
NHLRC1Q6VVB1 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
NHLRC1Q6VVB1 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.37
NHLRC1Q6VVB1 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC17.33■□□□□ 0.37
NHLRC1Q6VVB1 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
NHLRC1Q6VVB1 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.37
NHLRC1Q6VVB1 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
NHLRC1Q6VVB1 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
NHLRC1Q6VVB1 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
NHLRC1Q6VVB1 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.37
NHLRC1Q6VVB1 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
NHLRC1Q6VVB1 NBPF21P-201ENST00000425093 1451 ntBASIC17.33■□□□□ 0.37
NHLRC1Q6VVB1 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
NHLRC1Q6VVB1 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
NHLRC1Q6VVB1 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
NHLRC1Q6VVB1 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
NHLRC1Q6VVB1 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
NHLRC1Q6VVB1 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
NHLRC1Q6VVB1 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC17.33■□□□□ 0.36
NHLRC1Q6VVB1 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
NHLRC1Q6VVB1 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
NHLRC1Q6VVB1 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
NHLRC1Q6VVB1 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC17.33■□□□□ 0.36
NHLRC1Q6VVB1 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
NHLRC1Q6VVB1 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
NHLRC1Q6VVB1 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC17.33■□□□□ 0.36
NHLRC1Q6VVB1 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
NHLRC1Q6VVB1 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
NHLRC1Q6VVB1 ZNF815P-204ENST00000434898 1737 ntBASIC17.33■□□□□ 0.36
NHLRC1Q6VVB1 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
NHLRC1Q6VVB1 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC17.32■□□□□ 0.36
NHLRC1Q6VVB1 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
NHLRC1Q6VVB1 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
NHLRC1Q6VVB1 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
NHLRC1Q6VVB1 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
NHLRC1Q6VVB1 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
NHLRC1Q6VVB1 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
NHLRC1Q6VVB1 ANKRD18DP-204ENST00000455355 1975 ntBASIC17.32■□□□□ 0.36
NHLRC1Q6VVB1 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC17.32■□□□□ 0.36
NHLRC1Q6VVB1 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
NHLRC1Q6VVB1 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC17.32■□□□□ 0.36
NHLRC1Q6VVB1 TUBB8P6-201ENST00000436895 1288 ntBASIC17.32■□□□□ 0.36
NHLRC1Q6VVB1 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC17.32■□□□□ 0.36
NHLRC1Q6VVB1 AC128676.1-201ENST00000454392 318 ntBASIC17.32■□□□□ 0.36
NHLRC1Q6VVB1 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
NHLRC1Q6VVB1 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
NHLRC1Q6VVB1 AC006058.3-201ENST00000606217 1069 ntBASIC17.32■□□□□ 0.36
NHLRC1Q6VVB1 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
NHLRC1Q6VVB1 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
NHLRC1Q6VVB1 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
NHLRC1Q6VVB1 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC17.32■□□□□ 0.36
NHLRC1Q6VVB1 AC104417.2-201ENST00000562989 1793 ntBASIC17.32■□□□□ 0.36
NHLRC1Q6VVB1 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
NHLRC1Q6VVB1 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC17.32■□□□□ 0.36
NHLRC1Q6VVB1 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
NHLRC1Q6VVB1 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC17.32■□□□□ 0.36
NHLRC1Q6VVB1 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
NHLRC1Q6VVB1 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC17.32■□□□□ 0.36
NHLRC1Q6VVB1 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
NHLRC1Q6VVB1 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
NHLRC1Q6VVB1 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC17.31■□□□□ 0.36
NHLRC1Q6VVB1 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
NHLRC1Q6VVB1 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
NHLRC1Q6VVB1 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
NHLRC1Q6VVB1 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
NHLRC1Q6VVB1 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
NHLRC1Q6VVB1 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
NHLRC1Q6VVB1 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
NHLRC1Q6VVB1 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC17.31■□□□□ 0.36
NHLRC1Q6VVB1 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
NHLRC1Q6VVB1 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC17.31■□□□□ 0.36
NHLRC1Q6VVB1 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
NHLRC1Q6VVB1 AL032819.2-201ENST00000624543 2162 ntBASIC17.31■□□□□ 0.36
NHLRC1Q6VVB1 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
NHLRC1Q6VVB1 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
NHLRC1Q6VVB1 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
NHLRC1Q6VVB1 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
NHLRC1Q6VVB1 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC17.31■□□□□ 0.36
NHLRC1Q6VVB1 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC17.31■□□□□ 0.36
NHLRC1Q6VVB1 LY6E-205ENST00000519611 635 ntTSL 3 BASIC17.31■□□□□ 0.36
NHLRC1Q6VVB1 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC17.31■□□□□ 0.36
NHLRC1Q6VVB1 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC17.31■□□□□ 0.36
NHLRC1Q6VVB1 PRKY-204ENST00000533551 1019 ntBASIC17.31■□□□□ 0.36
NHLRC1Q6VVB1 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
NHLRC1Q6VVB1 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC17.31■□□□□ 0.36
NHLRC1Q6VVB1 AC124016.1-201ENST00000609552 612 ntBASIC17.31■□□□□ 0.36
NHLRC1Q6VVB1 AL023875.1-201ENST00000640777 796 ntBASIC17.31■□□□□ 0.36
NHLRC1Q6VVB1 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC17.31■□□□□ 0.36
NHLRC1Q6VVB1 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC17.31■□□□□ 0.36
NHLRC1Q6VVB1 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC17.31■□□□□ 0.36
NHLRC1Q6VVB1 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
NHLRC1Q6VVB1 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
NHLRC1Q6VVB1 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
NHLRC1Q6VVB1 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 44.4 ms