Protein–RNA interactions for Protein: Q6ISU1

PTCRA, Pre T-cell antigen receptor alpha, humanhuman

Predicted RBP Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCRAQ6ISU1 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
PTCRAQ6ISU1 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC19.94■□□□□ 0.78
PTCRAQ6ISU1 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
PTCRAQ6ISU1 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
PTCRAQ6ISU1 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC19.94■□□□□ 0.78
PTCRAQ6ISU1 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC19.94■□□□□ 0.78
PTCRAQ6ISU1 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
PTCRAQ6ISU1 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC19.94■□□□□ 0.78
PTCRAQ6ISU1 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
PTCRAQ6ISU1 AL117328.2-201ENST00000624617 1940 ntBASIC19.94■□□□□ 0.78
PTCRAQ6ISU1 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
PTCRAQ6ISU1 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC19.93■□□□□ 0.78
PTCRAQ6ISU1 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
PTCRAQ6ISU1 TSPY22P-201ENST00000427496 604 ntBASIC19.93■□□□□ 0.78
PTCRAQ6ISU1 CIB2-208ENST00000560618 804 ntTSL 2 BASIC19.93■□□□□ 0.78
PTCRAQ6ISU1 AC012676.1-201ENST00000574705 1949 ntBASIC19.93■□□□□ 0.78
PTCRAQ6ISU1 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC19.93■□□□□ 0.78
PTCRAQ6ISU1 PLK5-205ENST00000642079 1969 ntBASIC19.93■□□□□ 0.78
PTCRAQ6ISU1 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC19.93■□□□□ 0.78
PTCRAQ6ISU1 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
PTCRAQ6ISU1 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
PTCRAQ6ISU1 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC19.92■□□□□ 0.78
PTCRAQ6ISU1 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
PTCRAQ6ISU1 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
PTCRAQ6ISU1 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
PTCRAQ6ISU1 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
PTCRAQ6ISU1 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
PTCRAQ6ISU1 ERF-202ENST00000440177 2032 ntTSL 2 BASIC19.92■□□□□ 0.78
PTCRAQ6ISU1 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
PTCRAQ6ISU1 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
PTCRAQ6ISU1 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
PTCRAQ6ISU1 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
PTCRAQ6ISU1 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
PTCRAQ6ISU1 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
PTCRAQ6ISU1 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC19.92■□□□□ 0.78
PTCRAQ6ISU1 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
PTCRAQ6ISU1 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
PTCRAQ6ISU1 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC19.92■□□□□ 0.78
PTCRAQ6ISU1 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC19.92■□□□□ 0.78
PTCRAQ6ISU1 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
PTCRAQ6ISU1 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC19.92■□□□□ 0.78
PTCRAQ6ISU1 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC19.92■□□□□ 0.78
PTCRAQ6ISU1 SPEG-225ENST00000617028 815 ntTSL 5 BASIC19.92■□□□□ 0.78
PTCRAQ6ISU1 NME4-212ENST00000621774 904 ntTSL 3 BASIC19.92■□□□□ 0.78
PTCRAQ6ISU1 WDR6-223ENST00000627177 207 ntTSL 2 BASIC19.92■□□□□ 0.78
PTCRAQ6ISU1 AF228730.7-201ENST00000641842 219 ntBASIC19.92■□□□□ 0.78
PTCRAQ6ISU1 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
PTCRAQ6ISU1 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC19.92■□□□□ 0.78
PTCRAQ6ISU1 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
PTCRAQ6ISU1 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
PTCRAQ6ISU1 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC19.92■□□□□ 0.78
PTCRAQ6ISU1 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
PTCRAQ6ISU1 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC19.92■□□□□ 0.78
PTCRAQ6ISU1 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
PTCRAQ6ISU1 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC19.92■□□□□ 0.78
PTCRAQ6ISU1 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
PTCRAQ6ISU1 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC19.92■□□□□ 0.78
PTCRAQ6ISU1 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
PTCRAQ6ISU1 CD37-204ENST00000535669 1674 ntTSL 2 BASIC19.91■□□□□ 0.78
PTCRAQ6ISU1 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC19.91■□□□□ 0.78
PTCRAQ6ISU1 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC19.91■□□□□ 0.78
PTCRAQ6ISU1 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC19.91■□□□□ 0.78
PTCRAQ6ISU1 TOB2P1-201ENST00000469761 992 ntBASIC19.91■□□□□ 0.78
PTCRAQ6ISU1 NAA38-203ENST00000575071 553 ntTSL 2 BASIC19.91■□□□□ 0.78
PTCRAQ6ISU1 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC19.91■□□□□ 0.78
PTCRAQ6ISU1 AC024243.1-201ENST00000609234 778 ntBASIC19.91■□□□□ 0.78
PTCRAQ6ISU1 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC19.91■□□□□ 0.78
PTCRAQ6ISU1 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
PTCRAQ6ISU1 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
PTCRAQ6ISU1 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC19.91■□□□□ 0.78
PTCRAQ6ISU1 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
PTCRAQ6ISU1 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
PTCRAQ6ISU1 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
PTCRAQ6ISU1 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
PTCRAQ6ISU1 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC19.9■□□□□ 0.78
PTCRAQ6ISU1 MIR574-201ENST00000385209 96 ntBASIC19.9■□□□□ 0.78
PTCRAQ6ISU1 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC19.9■□□□□ 0.78
PTCRAQ6ISU1 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC19.9■□□□□ 0.78
PTCRAQ6ISU1 AC092183.1-201ENST00000469884 875 ntBASIC19.9■□□□□ 0.78
PTCRAQ6ISU1 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC19.9■□□□□ 0.78
PTCRAQ6ISU1 TPM1-218ENST00000559281 851 ntTSL 5 BASIC19.9■□□□□ 0.78
PTCRAQ6ISU1 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
PTCRAQ6ISU1 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
PTCRAQ6ISU1 TBC1D3P2-202ENST00000577902 1649 ntBASIC19.9■□□□□ 0.78
PTCRAQ6ISU1 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC19.9■□□□□ 0.78
PTCRAQ6ISU1 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
PTCRAQ6ISU1 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
PTCRAQ6ISU1 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
PTCRAQ6ISU1 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
PTCRAQ6ISU1 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
PTCRAQ6ISU1 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
PTCRAQ6ISU1 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
PTCRAQ6ISU1 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC19.89■□□□□ 0.77
PTCRAQ6ISU1 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
PTCRAQ6ISU1 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
PTCRAQ6ISU1 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC19.89■□□□□ 0.77
PTCRAQ6ISU1 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC19.89■□□□□ 0.77
PTCRAQ6ISU1 KRT16P4-201ENST00000453883 522 ntBASIC19.89■□□□□ 0.77
PTCRAQ6ISU1 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
PTCRAQ6ISU1 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC19.89■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 40 ms