Protein–RNA interactions for Protein: Q53EL6

PDCD4, Programmed cell death protein 4, humanhuman

Known RBP Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD4Q53EL6 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
PDCD4Q53EL6 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC18.52■□□□□ 0.56
PDCD4Q53EL6 ANKRD18DP-204ENST00000455355 1975 ntBASIC18.52■□□□□ 0.56
PDCD4Q53EL6 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC18.52■□□□□ 0.56
PDCD4Q53EL6 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
PDCD4Q53EL6 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
PDCD4Q53EL6 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC18.52■□□□□ 0.56
PDCD4Q53EL6 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC18.52■□□□□ 0.56
PDCD4Q53EL6 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
PDCD4Q53EL6 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
PDCD4Q53EL6 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
PDCD4Q53EL6 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC18.52■□□□□ 0.56
PDCD4Q53EL6 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC18.52■□□□□ 0.56
PDCD4Q53EL6 RER1-204ENST00000378518 522 ntTSL 3 BASIC18.52■□□□□ 0.56
PDCD4Q53EL6 AC004911.1-201ENST00000416316 871 ntBASIC18.52■□□□□ 0.56
PDCD4Q53EL6 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC18.52■□□□□ 0.56
PDCD4Q53EL6 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC18.52■□□□□ 0.56
PDCD4Q53EL6 MIR5787-201ENST00000611784 55 ntBASIC18.52■□□□□ 0.56
PDCD4Q53EL6 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
PDCD4Q53EL6 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
PDCD4Q53EL6 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
PDCD4Q53EL6 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
PDCD4Q53EL6 USP39-202ENST00000409025 1946 ntTSL 5 BASIC18.52■□□□□ 0.56
PDCD4Q53EL6 MKRN4P-201ENST00000444706 1521 ntBASIC18.52■□□□□ 0.56
PDCD4Q53EL6 AL031598.1-201ENST00000561511 1773 ntBASIC18.52■□□□□ 0.55
PDCD4Q53EL6 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC18.52■□□□□ 0.55
PDCD4Q53EL6 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC18.52■□□□□ 0.55
PDCD4Q53EL6 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
PDCD4Q53EL6 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
PDCD4Q53EL6 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC18.52■□□□□ 0.55
PDCD4Q53EL6 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
PDCD4Q53EL6 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
PDCD4Q53EL6 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC18.51■□□□□ 0.55
PDCD4Q53EL6 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC18.51■□□□□ 0.55
PDCD4Q53EL6 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
PDCD4Q53EL6 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
PDCD4Q53EL6 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
PDCD4Q53EL6 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC18.51■□□□□ 0.55
PDCD4Q53EL6 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
PDCD4Q53EL6 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
PDCD4Q53EL6 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
PDCD4Q53EL6 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
PDCD4Q53EL6 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC18.51■□□□□ 0.55
PDCD4Q53EL6 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
PDCD4Q53EL6 MFF-205ENST00000354503 1085 ntTSL 2 BASIC18.51■□□□□ 0.55
PDCD4Q53EL6 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
PDCD4Q53EL6 NME1-207ENST00000480143 964 ntTSL 2 BASIC18.51■□□□□ 0.55
PDCD4Q53EL6 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
PDCD4Q53EL6 MARS-234ENST00000630571 216 ntTSL 5 BASIC18.51■□□□□ 0.55
PDCD4Q53EL6 MARS-235ENST00000630803 183 ntTSL 3 BASIC18.51■□□□□ 0.55
PDCD4Q53EL6 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
PDCD4Q53EL6 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC18.51■□□□□ 0.55
PDCD4Q53EL6 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC18.51■□□□□ 0.55
PDCD4Q53EL6 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC18.51■□□□□ 0.55
PDCD4Q53EL6 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
PDCD4Q53EL6 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
PDCD4Q53EL6 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
PDCD4Q53EL6 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC18.51■□□□□ 0.55
PDCD4Q53EL6 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC18.5■□□□□ 0.55
PDCD4Q53EL6 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC18.5■□□□□ 0.55
PDCD4Q53EL6 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
PDCD4Q53EL6 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC18.5■□□□□ 0.55
PDCD4Q53EL6 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
PDCD4Q53EL6 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
PDCD4Q53EL6 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
PDCD4Q53EL6 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
PDCD4Q53EL6 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
PDCD4Q53EL6 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC18.5■□□□□ 0.55
PDCD4Q53EL6 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC18.5■□□□□ 0.55
PDCD4Q53EL6 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
PDCD4Q53EL6 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC18.5■□□□□ 0.55
PDCD4Q53EL6 GGT1-206ENST00000404223 952 ntTSL 2 BASIC18.5■□□□□ 0.55
PDCD4Q53EL6 SERPINH1P1-201ENST00000419794 1249 ntBASIC18.5■□□□□ 0.55
PDCD4Q53EL6 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC18.5■□□□□ 0.55
PDCD4Q53EL6 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC18.5■□□□□ 0.55
PDCD4Q53EL6 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
PDCD4Q53EL6 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC18.5■□□□□ 0.55
PDCD4Q53EL6 PHB2-213ENST00000546111 858 ntTSL 2 BASIC18.5■□□□□ 0.55
PDCD4Q53EL6 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
PDCD4Q53EL6 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
PDCD4Q53EL6 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
PDCD4Q53EL6 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
PDCD4Q53EL6 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
PDCD4Q53EL6 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
PDCD4Q53EL6 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
PDCD4Q53EL6 SDHAP1-207ENST00000440850 2000 ntBASIC18.5■□□□□ 0.55
PDCD4Q53EL6 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
PDCD4Q53EL6 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
PDCD4Q53EL6 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
PDCD4Q53EL6 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC18.5■□□□□ 0.55
PDCD4Q53EL6 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
PDCD4Q53EL6 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC18.5■□□□□ 0.55
PDCD4Q53EL6 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
PDCD4Q53EL6 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
PDCD4Q53EL6 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
PDCD4Q53EL6 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC18.49■□□□□ 0.55
PDCD4Q53EL6 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
PDCD4Q53EL6 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
PDCD4Q53EL6 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
PDCD4Q53EL6 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 38 ms