Protein–RNA interactions for Protein: P31483

TIA1, Nucleolysin TIA-1 isoform p40, humanhuman

Known RBP eCLIP

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TIA1P31483 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC19.83■□□□□ 0.766e-14■■■□□ 17.6
TIA1P31483 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC17.51■□□□□ 0.396e-14■■■□□ 17.6
TIA1P31483 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.216e-14■■■□□ 17.6
TIA1P31483 VEGFA-215ENST00000497139 2746 ntTSL 1 (best)12.22□□□□□ -0.456e-16■■■□□ 17.6
TIA1P31483 VEGFA-212ENST00000480614 12167 ntTSL 1 (best)9.17□□□□□ -0.947e-14■■■□□ 17.6
TIA1P31483 NUP98-201ENST00000324932 6973 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.178e-7■■■□□ 17.6
TIA1P31483 NUP98-203ENST00000359171 7023 ntTSL 5 BASIC13.97□□□□□ -0.178e-7■■■□□ 17.6
TIA1P31483 NUP98-202ENST00000355260 5628 ntTSL 5 BASIC7.86□□□□□ -1.158e-7■■■□□ 17.6
TIA1P31483 ATXN2L-218ENST00000565971 3264 ntTSL 1 (best)13.98□□□□□ -0.174e-10■■■□□ 17.6
TIA1P31483 SNW1-201ENST00000261531 2163 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.012e-9■■■□□ 17.6
TIA1P31483 SNW1-204ENST00000554775 1687 ntTSL 5 BASIC6.06□□□□□ -1.442e-9■■■□□ 17.6
TIA1P31483 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.453e-9■■■□□ 17.6
TIA1P31483 DLK1-201ENST00000331224 1324 ntTSL 1 (best) BASIC13.74□□□□□ -0.213e-9■■■□□ 17.6
TIA1P31483 SLC38A2-204ENST00000548111 583 ntTSL 44.38□□□□□ -1.712e-6■■■□□ 17.6
TIA1P31483 NUDT3-201ENST00000607016 9905 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.366e-8■■■□□ 17.6
TIA1P31483 RPS10-NUDT3-202ENST00000639725 4782 ntAPPRIS P1 TSL 5 BASIC9.93□□□□□ -0.824e-7■■■□□ 17.6
TIA1P31483 RPS10-NUDT3-203ENST00000639877 2911 ntAPPRIS P1 TSL 5 BASIC9.59□□□□□ -0.874e-7■■■□□ 17.6
TIA1P31483 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.021e-28■■■□□ 17.6
TIA1P31483 MT2A-204ENST00000563985 688 ntTSL 212.59□□□□□ -0.391e-28■■■□□ 17.6
TIA1P31483 MT2A-202ENST00000561491 581 ntTSL 2 BASIC12.58□□□□□ -0.41e-28■■■□□ 17.6
TIA1P31483 MT2A-203ENST00000562017 903 nt12.38□□□□□ -0.431e-28■■■□□ 17.6
TIA1P31483 MT2A-205ENST00000567300 416 ntTSL 211.72□□□□□ -0.531e-28■■■□□ 17.6
TIA1P31483 CHD6-202ENST00000373222 2477 ntTSL 1 (best) BASIC6.08□□□□□ -1.442e-6■■■□□ 17.6
TIA1P31483 CHD6-203ENST00000373233 10818 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.442e-6■■■□□ 17.6
TIA1P31483 CHD6-209ENST00000482596 599 ntTSL 1 (best)5.48□□□□□ -1.532e-6■■■□□ 17.6
TIA1P31483 RNF213-203ENST00000427003 3552 ntTSL 1 (best)7.34□□□□□ -1.234e-8■■■□□ 17.6
TIA1P31483 RNF213-210ENST00000560083 4212 ntTSL 26.5□□□□□ -1.374e-8■■■□□ 17.6
TIA1P31483 JPT2-211ENST00000567717 857 ntTSL 315.68■□□□□ 0.11e-9■■■□□ 17.6
TIA1P31483 AL031708.1-201ENST00000454337 5326 ntAPPRIS P1 TSL 2 BASIC12.12□□□□□ -0.471e-9■■■□□ 17.6
TIA1P31483 JPT2-210ENST00000566925 570 ntTSL 48.06□□□□□ -1.121e-9■■■□□ 17.6
TIA1P31483 A2M-212ENST00000545828 471 ntTSL 44.82□□□□□ -1.642e-6■■■□□ 17.6
TIA1P31483 NUP58-210ENST00000477876 560 ntTSL 55□□□□□ -1.617e-6■■■□□ 17.6
TIA1P31483 RNF168-202ENST00000437070 2202 ntTSL 216.99■□□□□ 0.313e-6■■■□□ 17.6
TIA1P31483 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.033e-6■■■□□ 17.6
TIA1P31483 CABIN1-208ENST00000467937 593 ntTSL 317.35■□□□□ 0.379e-7■■■□□ 17.6
TIA1P31483 ZCWPW2-203ENST00000420223 816 ntTSL 515.23■□□□□ 0.031e-6■■■□□ 17.6
TIA1P31483 AC098650.1-201ENST00000635992 3535 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.471e-6■■■□□ 17.6
TIA1P31483 ZCWPW2-201ENST00000383768 1716 ntAPPRIS P2 TSL 1 (best) BASIC7.13□□□□□ -1.271e-6■■■□□ 17.6
TIA1P31483 SGK494-203ENST00000469832 602 ntTSL 313.39□□□□□ -0.271e-12■■■□□ 17.6
TIA1P31483 SGK494-212ENST00000581199 866 ntTSL 1 (best)12.96□□□□□ -0.331e-12■■■□□ 17.6
TIA1P31483 SGK494-207ENST00000527863 598 ntTSL 211.19□□□□□ -0.621e-12■■■□□ 17.6
TIA1P31483 SGK494-209ENST00000530121 581 ntTSL 311□□□□□ -0.651e-12■■■□□ 17.6
TIA1P31483 SGK494-201ENST00000301037 1233 ntAPPRIS P1 TSL 5 BASIC10.48□□□□□ -0.731e-12■■■□□ 17.6
TIA1P31483 SGK494-206ENST00000526073 571 ntTSL 410.08□□□□□ -0.81e-12■■■□□ 17.6
TIA1P31483 SGK494-202ENST00000461399 673 ntTSL 59.8□□□□□ -0.841e-12■■■□□ 17.6
TIA1P31483 SGK494-208ENST00000527918 632 ntTSL 28.94□□□□□ -0.981e-12■■■□□ 17.6
TIA1P31483 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.261e-6■■■□□ 17.6
TIA1P31483 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC19.45■□□□□ 0.79e-8■■■□□ 17.6
TIA1P31483 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.689e-8■■■□□ 17.6
TIA1P31483 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC18.79■□□□□ 0.69e-8■■■□□ 17.6
TIA1P31483 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC17.86■□□□□ 0.459e-8■■■□□ 17.6
TIA1P31483 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.432e-11■■■□□ 17.6
TIA1P31483 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC16.86■□□□□ 0.299e-8■■■□□ 17.6
TIA1P31483 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC16.05■□□□□ 0.165e-6■■■□□ 17.6
TIA1P31483 FGFR1-204ENST00000356207 3824 ntTSL 1 (best) BASIC14.04□□□□□ -0.169e-8■■■□□ 17.6
TIA1P31483 FGFR1-201ENST00000326324 3816 ntTSL 1 (best) BASIC13.91□□□□□ -0.189e-8■■■□□ 17.6
TIA1P31483 FGFR1-202ENST00000335922 4157 ntTSL 1 (best) BASIC13.91□□□□□ -0.189e-8■■■□□ 17.6
TIA1P31483 FGFR1-211ENST00000425967 5375 ntTSL 1 (best) BASIC12.13□□□□□ -0.479e-8■■■□□ 17.6
TIA1P31483 FGFR1-209ENST00000397113 3680 ntAPPRIS ALT1 TSL 2 BASIC9.69□□□□□ -0.869e-8■■■□□ 17.6
TIA1P31483 NECAB3-212ENST00000485976 1016 ntTSL 520.83■□□□□ 0.932e-6■■■□□ 17.6
TIA1P31483 NECAB3-217ENST00000606106 591 ntTSL 418.18■□□□□ 0.52e-6■■■□□ 17.6
TIA1P31483 NECAB3-208ENST00000480994 732 ntTSL 515.62■□□□□ 0.092e-6■■■□□ 17.6
TIA1P31483 USP15-205ENST00000546694 799 ntTSL 54.16□□□□□ -1.749e-7■■■□□ 17.6
TIA1P31483 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC14.61□□□□□ -0.075e-8■■■□□ 17.6
TIA1P31483 RAF1-201ENST00000251849 3300 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.215e-8■■■□□ 17.6
TIA1P31483 CREB3L2-201ENST00000330387 7412 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.932e-8■■■□□ 17.6
TIA1P31483 CREB3L2-207ENST00000616381 7133 ntTSL 5 BASIC8.9□□□□□ -0.982e-8■■■□□ 17.6
TIA1P31483 PTAR1-203ENST00000415701 826 ntTSL 34.26□□□□□ -1.732e-7■■■□□ 17.6
TIA1P31483 PTAR1-202ENST00000377200 9876 ntTSL 1 (best) BASIC3.77□□□□□ -1.812e-7■■■□□ 17.6
TIA1P31483 TMBIM6-225ENST00000552370 882 ntAPPRIS P3 TSL 5 BASIC7.27□□□□□ -1.252e-9■■■□□ 17.6
TIA1P31483 HNRNPU-229ENST00000640440 871 ntTSL 313.21□□□□□ -0.299e-7■■■□□ 17.5
TIA1P31483 AC005394.2-201ENST00000592347 3113 ntTSL 1 (best) BASIC13.24□□□□□ -0.298e-7■■■□□ 17.5
TIA1P31483 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC24.63■■□□□ 1.534e-14■■■□□ 17.5
TIA1P31483 RBM4-209ENST00000515838 943 ntTSL 213.64□□□□□ -0.232e-6■■■□□ 17.5
TIA1P31483 NSD2-218ENST00000508355 2092 ntTSL 1 (best)13.57□□□□□ -0.242e-12■■■□□ 17.5
TIA1P31483 NSD2-216ENST00000507820 528 ntTSL 511.8□□□□□ -0.522e-12■■■□□ 17.5
TIA1P31483 NSD2-219ENST00000508803 4251 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.072e-12■■■□□ 17.5
TIA1P31483 NSD2-224ENST00000514045 3964 ntTSL 1 (best) BASIC7.77□□□□□ -1.172e-12■■■□□ 17.5
TIA1P31483 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC14.89□□□□□ -0.032e-7■■■□□ 17.5
TIA1P31483 GOLGA2-203ENST00000458730 704 ntTSL 516.87■□□□□ 0.294e-18■■■□□ 17.5
TIA1P31483 GOLGA2-209ENST00000490257 1964 ntTSL 216.84■□□□□ 0.294e-18■■■□□ 17.5
TIA1P31483 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC16.24■□□□□ 0.194e-18■■■□□ 17.5
TIA1P31483 GOLGA2-212ENST00000609374 2973 ntTSL 1 (best) BASIC13.9□□□□□ -0.184e-18■■■□□ 17.5
TIA1P31483 GOLGA2-202ENST00000450617 1439 ntTSL 513.64□□□□□ -0.234e-18■■■□□ 17.5
TIA1P31483 GOLGA2-214ENST00000611957 4259 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.664e-18■■■□□ 17.5
TIA1P31483 GOLGA2-201ENST00000421699 4260 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.724e-18■■■□□ 17.5
TIA1P31483 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC19.62■□□□□ 0.731e-6■■■□□ 17.5
TIA1P31483 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.181e-6■■■□□ 17.5
TIA1P31483 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC14.56□□□□□ -0.081e-6■■■□□ 17.5
TIA1P31483 YPEL5-210ENST00000495673 935 ntTSL 1 (best)8.07□□□□□ -1.121e-10■■■□□ 17.5
TIA1P31483 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC16.54■□□□□ 0.246e-17■■■□□ 17.5
TIA1P31483 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.086e-17■■■□□ 17.5
TIA1P31483 CST3-203ENST00000398411 3286 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.466e-17■■■□□ 17.5
TIA1P31483 FUS-209ENST00000566605 1787 ntTSL 1 (best)24.95■■□□□ 1.584e-7■■■□□ 17.5
TIA1P31483 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC23.55■■□□□ 1.364e-7■■■□□ 17.5
TIA1P31483 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC21.08■□□□□ 0.974e-7■■■□□ 17.5
TIA1P31483 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.024e-7■■■□□ 17.5
TIA1P31483 FUS-206ENST00000487509 4920 ntTSL 213.07□□□□□ -0.324e-7■■■□□ 17.5
TIA1P31483 MKLN1-203ENST00000421797 2460 ntTSL 2 BASIC12.06□□□□□ -0.482e-7■■■□□ 17.5
TIA1P31483 MKLN1-209ENST00000494785 2386 ntTSL 1 (best)10.62□□□□□ -0.712e-7■■■□□ 17.5
Retrieved 100 of 17,249 protein–RNA pairs in 154.5 ms