Protein–RNA interactions for Protein: P25440

BRD2, Bromodomain-containing protein 2, humanhuman

Known RBP Predictions only

Length 801 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRD2P25440 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC20.7■□□□□ 0.9
BRD2P25440 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
BRD2P25440 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC20.7■□□□□ 0.9
BRD2P25440 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
BRD2P25440 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC20.69■□□□□ 0.9
BRD2P25440 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
BRD2P25440 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
BRD2P25440 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
BRD2P25440 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
BRD2P25440 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
BRD2P25440 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
BRD2P25440 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
BRD2P25440 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
BRD2P25440 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
BRD2P25440 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC20.69■□□□□ 0.9
BRD2P25440 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
BRD2P25440 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC20.69■□□□□ 0.9
BRD2P25440 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
BRD2P25440 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC20.69■□□□□ 0.9
BRD2P25440 TK2-204ENST00000525974 1178 ntTSL 2 BASIC20.69■□□□□ 0.9
BRD2P25440 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC20.69■□□□□ 0.9
BRD2P25440 AC004264.1-201ENST00000608354 794 ntBASIC20.69■□□□□ 0.9
BRD2P25440 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
BRD2P25440 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
BRD2P25440 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
BRD2P25440 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC20.69■□□□□ 0.9
BRD2P25440 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC20.69■□□□□ 0.9
BRD2P25440 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC20.68■□□□□ 0.9
BRD2P25440 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
BRD2P25440 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
BRD2P25440 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC20.68■□□□□ 0.9
BRD2P25440 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC20.68■□□□□ 0.9
BRD2P25440 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC20.68■□□□□ 0.9
BRD2P25440 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
BRD2P25440 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
BRD2P25440 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
BRD2P25440 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
BRD2P25440 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC20.68■□□□□ 0.9
BRD2P25440 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
BRD2P25440 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC20.68■□□□□ 0.9
BRD2P25440 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC20.68■□□□□ 0.9
BRD2P25440 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC20.68■□□□□ 0.9
BRD2P25440 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
BRD2P25440 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
BRD2P25440 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC20.68■□□□□ 0.9
BRD2P25440 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
BRD2P25440 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
BRD2P25440 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
BRD2P25440 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC20.68■□□□□ 0.9
BRD2P25440 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
BRD2P25440 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
BRD2P25440 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
BRD2P25440 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC20.67■□□□□ 0.9
BRD2P25440 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
BRD2P25440 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
BRD2P25440 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
BRD2P25440 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
BRD2P25440 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
BRD2P25440 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC20.67■□□□□ 0.9
BRD2P25440 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC20.67■□□□□ 0.9
BRD2P25440 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
BRD2P25440 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
BRD2P25440 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
BRD2P25440 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC20.67■□□□□ 0.9
BRD2P25440 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
BRD2P25440 KRT16P5-201ENST00000455284 522 ntBASIC20.67■□□□□ 0.9
BRD2P25440 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
BRD2P25440 C1QL1P1-201ENST00000568105 661 ntBASIC20.67■□□□□ 0.9
BRD2P25440 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC20.67■□□□□ 0.9
BRD2P25440 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC20.67■□□□□ 0.9
BRD2P25440 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC20.67■□□□□ 0.9
BRD2P25440 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
BRD2P25440 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC20.67■□□□□ 0.9
BRD2P25440 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC20.67■□□□□ 0.9
BRD2P25440 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC20.67■□□□□ 0.9
BRD2P25440 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
BRD2P25440 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC20.67■□□□□ 0.9
BRD2P25440 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
BRD2P25440 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC20.67■□□□□ 0.9
BRD2P25440 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
BRD2P25440 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC20.66■□□□□ 0.9
BRD2P25440 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
BRD2P25440 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
BRD2P25440 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
BRD2P25440 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
BRD2P25440 PEX7-202ENST00000367756 680 ntTSL 3 BASIC20.66■□□□□ 0.9
BRD2P25440 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC20.66■□□□□ 0.9
BRD2P25440 NME1-207ENST00000480143 964 ntTSL 2 BASIC20.66■□□□□ 0.9
BRD2P25440 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC20.66■□□□□ 0.9
BRD2P25440 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC20.66■□□□□ 0.9
BRD2P25440 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC20.66■□□□□ 0.9
BRD2P25440 AC142381.4-202ENST00000563973 229 ntBASIC20.66■□□□□ 0.9
BRD2P25440 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC20.66■□□□□ 0.9
BRD2P25440 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC20.66■□□□□ 0.9
BRD2P25440 FAM197Y4-202ENST00000622692 608 ntBASIC20.66■□□□□ 0.9
BRD2P25440 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
BRD2P25440 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
BRD2P25440 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC20.66■□□□□ 0.9
BRD2P25440 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC20.66■□□□□ 0.9
BRD2P25440 ZNF815P-204ENST00000434898 1737 ntBASIC20.66■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 40.1 ms