Protein–RNA interactions for Protein: P13236

CCL4, C-C motif chemokine 4, humanhuman

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL4P13236 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC18.25■□□□□ 0.51
CCL4P13236 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
CCL4P13236 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC18.25■□□□□ 0.51
CCL4P13236 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
CCL4P13236 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC18.25■□□□□ 0.51
CCL4P13236 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CCL4P13236 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC18.25■□□□□ 0.51
CCL4P13236 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC18.25■□□□□ 0.51
CCL4P13236 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CCL4P13236 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CCL4P13236 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC18.24■□□□□ 0.51
CCL4P13236 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CCL4P13236 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CCL4P13236 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
CCL4P13236 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
CCL4P13236 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CCL4P13236 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
CCL4P13236 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CCL4P13236 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CCL4P13236 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC18.24■□□□□ 0.51
CCL4P13236 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC18.24■□□□□ 0.51
CCL4P13236 PRSS44-201ENST00000515154 1146 ntBASIC18.24■□□□□ 0.51
CCL4P13236 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CCL4P13236 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC18.24■□□□□ 0.51
CCL4P13236 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC18.24■□□□□ 0.51
CCL4P13236 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC18.24■□□□□ 0.51
CCL4P13236 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
CCL4P13236 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CCL4P13236 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
CCL4P13236 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC18.24■□□□□ 0.51
CCL4P13236 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
CCL4P13236 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC18.24■□□□□ 0.51
CCL4P13236 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC18.24■□□□□ 0.51
CCL4P13236 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC18.24■□□□□ 0.51
CCL4P13236 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC18.24■□□□□ 0.51
CCL4P13236 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC18.24■□□□□ 0.51
CCL4P13236 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CCL4P13236 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CCL4P13236 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CCL4P13236 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CCL4P13236 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CCL4P13236 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CCL4P13236 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC18.23■□□□□ 0.51
CCL4P13236 IER3-202ENST00000376377 1350 ntBASIC18.23■□□□□ 0.51
CCL4P13236 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC18.23■□□□□ 0.51
CCL4P13236 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CCL4P13236 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC18.23■□□□□ 0.51
CCL4P13236 AC009947.2-201ENST00000444014 672 ntBASIC18.23■□□□□ 0.51
CCL4P13236 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC18.23■□□□□ 0.51
CCL4P13236 KRT18P56-201ENST00000507275 550 ntBASIC18.23■□□□□ 0.51
CCL4P13236 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC18.23■□□□□ 0.51
CCL4P13236 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CCL4P13236 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CCL4P13236 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
CCL4P13236 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CCL4P13236 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CCL4P13236 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CCL4P13236 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CCL4P13236 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
CCL4P13236 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
CCL4P13236 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC18.22■□□□□ 0.51
CCL4P13236 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CCL4P13236 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CCL4P13236 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CCL4P13236 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC18.22■□□□□ 0.51
CCL4P13236 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
CCL4P13236 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC18.22■□□□□ 0.51
CCL4P13236 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CCL4P13236 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC18.22■□□□□ 0.51
CCL4P13236 NT5C-210ENST00000582160 860 ntTSL 2 BASIC18.22■□□□□ 0.51
CCL4P13236 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC18.22■□□□□ 0.51
CCL4P13236 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
CCL4P13236 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CCL4P13236 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CCL4P13236 GABARAPL3-202ENST00000624044 1851 ntBASIC18.22■□□□□ 0.51
CCL4P13236 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CCL4P13236 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CCL4P13236 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC18.22■□□□□ 0.51
CCL4P13236 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC18.21■□□□□ 0.51
CCL4P13236 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CCL4P13236 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
CCL4P13236 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
CCL4P13236 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CCL4P13236 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
CCL4P13236 SNX5-210ENST00000481323 562 ntTSL 3 BASIC18.21■□□□□ 0.51
CCL4P13236 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC18.21■□□□□ 0.51
CCL4P13236 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC18.21■□□□□ 0.51
CCL4P13236 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC18.21■□□□□ 0.51
CCL4P13236 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC18.21■□□□□ 0.51
CCL4P13236 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC18.21■□□□□ 0.51
CCL4P13236 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC18.21■□□□□ 0.51
CCL4P13236 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC18.21■□□□□ 0.51
CCL4P13236 AC008622.2-201ENST00000617006 1229 ntBASIC18.21■□□□□ 0.51
CCL4P13236 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CCL4P13236 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
CCL4P13236 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC18.21■□□□□ 0.51
CCL4P13236 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
CCL4P13236 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
CCL4P13236 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
CCL4P13236 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 25.8 ms