Protein–RNA interactions for Protein: P01848

TRAC, T-cell receptor alpha chain C region, humanhuman

Predictions only

Length 142 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRACP01848 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
TRACP01848 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC12.57□□□□□ -0.4
TRACP01848 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
TRACP01848 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
TRACP01848 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
TRACP01848 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
TRACP01848 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
TRACP01848 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
TRACP01848 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC12.57□□□□□ -0.4
TRACP01848 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC12.57□□□□□ -0.4
TRACP01848 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
TRACP01848 AGPS-201ENST00000264167 7764 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
TRACP01848 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
TRACP01848 CROCC-201ENST00000375541 6656 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
TRACP01848 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
TRACP01848 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
TRACP01848 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC12.57□□□□□ -0.4
TRACP01848 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
TRACP01848 AC137630.3-201ENST00000607245 391 ntBASIC12.57□□□□□ -0.4
TRACP01848 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
TRACP01848 UBE3A-207ENST00000614096 8741 ntAPPRIS ALT1 TSL 1 (best) BASIC12.57□□□□□ -0.4
TRACP01848 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
TRACP01848 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
TRACP01848 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
TRACP01848 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
TRACP01848 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
TRACP01848 RNF126P1-201ENST00000567452 1320 ntBASIC12.57□□□□□ -0.4
TRACP01848 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
TRACP01848 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
TRACP01848 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
TRACP01848 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
TRACP01848 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
TRACP01848 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC12.56□□□□□ -0.4
TRACP01848 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
TRACP01848 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
TRACP01848 RALGAPA1-203ENST00000389698 7864 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
TRACP01848 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
TRACP01848 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
TRACP01848 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC12.56□□□□□ -0.4
TRACP01848 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC12.56□□□□□ -0.4
TRACP01848 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
TRACP01848 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
TRACP01848 UHMK1-202ENST00000489294 8478 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
TRACP01848 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
TRACP01848 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
TRACP01848 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC12.56□□□□□ -0.4
TRACP01848 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
TRACP01848 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC12.56□□□□□ -0.4
TRACP01848 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC12.56□□□□□ -0.4
TRACP01848 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
TRACP01848 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC12.56□□□□□ -0.4
TRACP01848 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
TRACP01848 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC12.56□□□□□ -0.4
TRACP01848 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC12.56□□□□□ -0.4
TRACP01848 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
TRACP01848 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
TRACP01848 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
TRACP01848 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC12.56□□□□□ -0.4
TRACP01848 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
TRACP01848 AC068587.6-202ENST00000641839 5619 ntBASIC12.56□□□□□ -0.4
TRACP01848 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
TRACP01848 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
TRACP01848 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
TRACP01848 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
TRACP01848 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
TRACP01848 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC12.56□□□□□ -0.4
TRACP01848 FLJ16779-201ENST00000612722 7638 ntBASIC12.56□□□□□ -0.4
TRACP01848 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
TRACP01848 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
TRACP01848 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
TRACP01848 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
TRACP01848 MST1L-201ENST00000442552 2185 ntBASIC12.56□□□□□ -0.4
TRACP01848 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
TRACP01848 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
TRACP01848 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
TRACP01848 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
TRACP01848 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC12.56□□□□□ -0.4
TRACP01848 SCN3B-201ENST00000299333 5665 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
TRACP01848 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC12.55□□□□□ -0.4
TRACP01848 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
TRACP01848 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
TRACP01848 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
TRACP01848 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
TRACP01848 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
TRACP01848 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC12.55□□□□□ -0.4
TRACP01848 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC12.55□□□□□ -0.4
TRACP01848 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
TRACP01848 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC12.55□□□□□ -0.4
TRACP01848 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
TRACP01848 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC12.55□□□□□ -0.4
TRACP01848 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC12.55□□□□□ -0.4
TRACP01848 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC12.55□□□□□ -0.4
TRACP01848 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
TRACP01848 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC12.55□□□□□ -0.4
TRACP01848 RNF146-206ENST00000480444 843 ntTSL 2 BASIC12.55□□□□□ -0.4
TRACP01848 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
TRACP01848 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
TRACP01848 LTF-203ENST00000426532 2494 ntTSL 2 BASIC12.55□□□□□ -0.4
TRACP01848 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC12.55□□□□□ -0.4
TRACP01848 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms