Protein–RNA interactions for Protein: O96006

ZBED1, Zinc finger BED domain-containing protein 1, humanhuman

Predictions only

Length 694 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZBED1O96006 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
ZBED1O96006 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
ZBED1O96006 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
ZBED1O96006 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
ZBED1O96006 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
ZBED1O96006 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
ZBED1O96006 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC20.41■□□□□ 0.86
ZBED1O96006 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC20.41■□□□□ 0.86
ZBED1O96006 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC20.41■□□□□ 0.86
ZBED1O96006 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
ZBED1O96006 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
ZBED1O96006 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC20.41■□□□□ 0.86
ZBED1O96006 PENK-204ENST00000518770 863 ntTSL 2 BASIC20.41■□□□□ 0.86
ZBED1O96006 GRAP-204ENST00000573099 846 ntTSL 3 BASIC20.41■□□□□ 0.86
ZBED1O96006 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
ZBED1O96006 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC20.41■□□□□ 0.86
ZBED1O96006 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
ZBED1O96006 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
ZBED1O96006 KRT16P1-201ENST00000399124 1418 ntBASIC20.41■□□□□ 0.86
ZBED1O96006 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
ZBED1O96006 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC20.41■□□□□ 0.86
ZBED1O96006 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
ZBED1O96006 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
ZBED1O96006 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC20.41■□□□□ 0.86
ZBED1O96006 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
ZBED1O96006 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
ZBED1O96006 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
ZBED1O96006 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
ZBED1O96006 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
ZBED1O96006 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
ZBED1O96006 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC20.4■□□□□ 0.86
ZBED1O96006 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
ZBED1O96006 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
ZBED1O96006 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
ZBED1O96006 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
ZBED1O96006 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC20.4■□□□□ 0.86
ZBED1O96006 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
ZBED1O96006 SRI-203ENST00000419179 1307 ntTSL 2 BASIC20.4■□□□□ 0.86
ZBED1O96006 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
ZBED1O96006 TSPY7P-201ENST00000431358 1114 ntBASIC20.4■□□□□ 0.86
ZBED1O96006 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC20.4■□□□□ 0.86
ZBED1O96006 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC20.4■□□□□ 0.86
ZBED1O96006 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC20.4■□□□□ 0.86
ZBED1O96006 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC20.4■□□□□ 0.86
ZBED1O96006 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC20.4■□□□□ 0.86
ZBED1O96006 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC20.4■□□□□ 0.86
ZBED1O96006 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC20.4■□□□□ 0.86
ZBED1O96006 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC20.4■□□□□ 0.86
ZBED1O96006 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC20.4■□□□□ 0.86
ZBED1O96006 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
ZBED1O96006 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.86
ZBED1O96006 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.86
ZBED1O96006 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
ZBED1O96006 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
ZBED1O96006 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
ZBED1O96006 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC20.39■□□□□ 0.85
ZBED1O96006 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC20.39■□□□□ 0.85
ZBED1O96006 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC20.39■□□□□ 0.85
ZBED1O96006 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
ZBED1O96006 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
ZBED1O96006 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC20.39■□□□□ 0.85
ZBED1O96006 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
ZBED1O96006 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC20.39■□□□□ 0.85
ZBED1O96006 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
ZBED1O96006 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.85
ZBED1O96006 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
ZBED1O96006 TREX1-205ENST00000625293 1783 ntBASIC20.39■□□□□ 0.85
ZBED1O96006 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
ZBED1O96006 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
ZBED1O96006 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC20.38■□□□□ 0.85
ZBED1O96006 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
ZBED1O96006 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
ZBED1O96006 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
ZBED1O96006 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
ZBED1O96006 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
ZBED1O96006 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
ZBED1O96006 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
ZBED1O96006 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC20.38■□□□□ 0.85
ZBED1O96006 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
ZBED1O96006 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
ZBED1O96006 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
ZBED1O96006 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
ZBED1O96006 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC20.38■□□□□ 0.85
ZBED1O96006 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC20.38■□□□□ 0.85
ZBED1O96006 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC20.38■□□□□ 0.85
ZBED1O96006 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
ZBED1O96006 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC20.38■□□□□ 0.85
ZBED1O96006 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC20.38■□□□□ 0.85
ZBED1O96006 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
ZBED1O96006 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
ZBED1O96006 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
ZBED1O96006 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC20.37■□□□□ 0.85
ZBED1O96006 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
ZBED1O96006 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
ZBED1O96006 PWWP2AP1-201ENST00000429776 2273 ntBASIC20.37■□□□□ 0.85
ZBED1O96006 AC116562.4-201ENST00000641316 2276 ntBASIC20.37■□□□□ 0.85
ZBED1O96006 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
ZBED1O96006 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
ZBED1O96006 PPP1R14BP5-201ENST00000440334 435 ntBASIC20.37■□□□□ 0.85
ZBED1O96006 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC20.37■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 26.8 ms