Protein–RNA interactions for Protein: O60260

PRKN, E3 ubiquitin-protein ligase parkin, humanhuman

Predicted RBP Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKNO60260 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC17.98■□□□□ 0.47
PRKNO60260 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC17.98■□□□□ 0.47
PRKNO60260 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC17.98■□□□□ 0.47
PRKNO60260 DECR2-212ENST00000627716 352 ntTSL 2 BASIC17.98■□□□□ 0.47
PRKNO60260 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
PRKNO60260 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC17.98■□□□□ 0.47
PRKNO60260 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
PRKNO60260 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
PRKNO60260 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
PRKNO60260 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
PRKNO60260 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
PRKNO60260 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
PRKNO60260 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
PRKNO60260 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC17.97■□□□□ 0.47
PRKNO60260 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC17.97■□□□□ 0.47
PRKNO60260 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC17.97■□□□□ 0.47
PRKNO60260 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
PRKNO60260 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC17.97■□□□□ 0.47
PRKNO60260 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC17.97■□□□□ 0.47
PRKNO60260 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC17.97■□□□□ 0.47
PRKNO60260 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
PRKNO60260 AL031985.4-201ENST00000642138 673 ntBASIC17.97■□□□□ 0.47
PRKNO60260 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
PRKNO60260 ADM-207ENST00000530439 1839 ntTSL 2 BASIC17.97■□□□□ 0.47
PRKNO60260 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
PRKNO60260 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
PRKNO60260 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC17.97■□□□□ 0.47
PRKNO60260 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC17.97■□□□□ 0.47
PRKNO60260 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
PRKNO60260 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC17.96■□□□□ 0.47
PRKNO60260 TP73-202ENST00000354437 2140 ntTSL 5 BASIC17.96■□□□□ 0.47
PRKNO60260 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC17.96■□□□□ 0.47
PRKNO60260 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
PRKNO60260 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
PRKNO60260 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
PRKNO60260 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
PRKNO60260 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
PRKNO60260 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC17.96■□□□□ 0.47
PRKNO60260 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
PRKNO60260 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
PRKNO60260 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
PRKNO60260 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
PRKNO60260 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC17.96■□□□□ 0.47
PRKNO60260 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
PRKNO60260 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
PRKNO60260 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC17.96■□□□□ 0.47
PRKNO60260 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
PRKNO60260 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC17.96■□□□□ 0.47
PRKNO60260 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC17.96■□□□□ 0.47
PRKNO60260 GXYLT1P3-201ENST00000453058 1193 ntBASIC17.96■□□□□ 0.47
PRKNO60260 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
PRKNO60260 AC011506.1-201ENST00000474329 610 ntBASIC17.96■□□□□ 0.47
PRKNO60260 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC17.96■□□□□ 0.47
PRKNO60260 AC116562.2-201ENST00000507042 360 ntBASIC17.96■□□□□ 0.47
PRKNO60260 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC17.96■□□□□ 0.47
PRKNO60260 BX088651.1-201ENST00000540551 451 ntBASIC17.96■□□□□ 0.47
PRKNO60260 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC17.96■□□□□ 0.47
PRKNO60260 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC17.96■□□□□ 0.47
PRKNO60260 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC17.96■□□□□ 0.47
PRKNO60260 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
PRKNO60260 Z82202.1-201ENST00000623446 1880 ntBASIC17.96■□□□□ 0.47
PRKNO60260 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC17.96■□□□□ 0.47
PRKNO60260 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
PRKNO60260 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
PRKNO60260 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC17.96■□□□□ 0.47
PRKNO60260 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
PRKNO60260 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.46
PRKNO60260 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC17.96■□□□□ 0.46
PRKNO60260 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC17.95■□□□□ 0.46
PRKNO60260 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
PRKNO60260 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
PRKNO60260 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
PRKNO60260 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC17.95■□□□□ 0.46
PRKNO60260 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
PRKNO60260 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
PRKNO60260 RBM17P1-201ENST00000453646 1190 ntBASIC17.95■□□□□ 0.46
PRKNO60260 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
PRKNO60260 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
PRKNO60260 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC17.95■□□□□ 0.46
PRKNO60260 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC17.95■□□□□ 0.46
PRKNO60260 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC17.95■□□□□ 0.46
PRKNO60260 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC17.95■□□□□ 0.46
PRKNO60260 AC131212.4-201ENST00000623606 975 ntBASIC17.95■□□□□ 0.46
PRKNO60260 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
PRKNO60260 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC17.95■□□□□ 0.46
PRKNO60260 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
PRKNO60260 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
PRKNO60260 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
PRKNO60260 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
PRKNO60260 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC17.95■□□□□ 0.46
PRKNO60260 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC17.95■□□□□ 0.46
PRKNO60260 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
PRKNO60260 AC116562.4-201ENST00000641316 2276 ntBASIC17.95■□□□□ 0.46
PRKNO60260 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
PRKNO60260 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
PRKNO60260 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
PRKNO60260 AC079598.2-202ENST00000546624 1451 ntBASIC17.95■□□□□ 0.46
PRKNO60260 SDHAP1-207ENST00000440850 2000 ntBASIC17.94■□□□□ 0.46
PRKNO60260 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
PRKNO60260 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 37.6 ms