Protein–RNA interactions for Protein: O43805

SSNA1, Sjoegren syndrome nuclear autoantigen 1, humanhuman

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSNA1O43805 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC16.44■□□□□ 0.22
SSNA1O43805 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
SSNA1O43805 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC16.44■□□□□ 0.22
SSNA1O43805 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC16.44■□□□□ 0.22
SSNA1O43805 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC16.44■□□□□ 0.22
SSNA1O43805 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
SSNA1O43805 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
SSNA1O43805 CD276-201ENST00000318424 2738 ntTSL 5 BASIC16.44■□□□□ 0.22
SSNA1O43805 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
SSNA1O43805 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
SSNA1O43805 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC16.44■□□□□ 0.22
SSNA1O43805 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
SSNA1O43805 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC16.44■□□□□ 0.22
SSNA1O43805 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC16.44■□□□□ 0.22
SSNA1O43805 AC008175.2-201ENST00000612840 297 ntBASIC16.44■□□□□ 0.22
SSNA1O43805 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC16.44■□□□□ 0.22
SSNA1O43805 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
SSNA1O43805 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
SSNA1O43805 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
SSNA1O43805 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
SSNA1O43805 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
SSNA1O43805 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
SSNA1O43805 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
SSNA1O43805 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
SSNA1O43805 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC16.43■□□□□ 0.22
SSNA1O43805 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
SSNA1O43805 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
SSNA1O43805 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC16.43■□□□□ 0.22
SSNA1O43805 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC16.43■□□□□ 0.22
SSNA1O43805 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
SSNA1O43805 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC16.43■□□□□ 0.22
SSNA1O43805 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
SSNA1O43805 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
SSNA1O43805 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
SSNA1O43805 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC16.43■□□□□ 0.22
SSNA1O43805 PTCHD3P2-201ENST00000424937 1205 ntBASIC16.43■□□□□ 0.22
SSNA1O43805 PRTG-204ENST00000561292 833 ntTSL 3 BASIC16.43■□□□□ 0.22
SSNA1O43805 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC16.43■□□□□ 0.22
SSNA1O43805 BRD4-212ENST00000630599 726 ntTSL 2 BASIC16.43■□□□□ 0.22
SSNA1O43805 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
SSNA1O43805 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
SSNA1O43805 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
SSNA1O43805 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC16.43■□□□□ 0.22
SSNA1O43805 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
SSNA1O43805 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC16.43■□□□□ 0.22
SSNA1O43805 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
SSNA1O43805 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
SSNA1O43805 ABALON-201ENST00000629058 1903 ntBASIC16.43■□□□□ 0.22
SSNA1O43805 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
SSNA1O43805 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
SSNA1O43805 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC16.43■□□□□ 0.22
SSNA1O43805 AC093525.10-201ENST00000625130 1569 ntBASIC16.43■□□□□ 0.22
SSNA1O43805 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
SSNA1O43805 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC16.42■□□□□ 0.22
SSNA1O43805 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
SSNA1O43805 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
SSNA1O43805 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
SSNA1O43805 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
SSNA1O43805 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
SSNA1O43805 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
SSNA1O43805 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
SSNA1O43805 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
SSNA1O43805 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
SSNA1O43805 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
SSNA1O43805 POU5F1P4-201ENST00000413175 1085 ntBASIC16.42■□□□□ 0.22
SSNA1O43805 PTPA-214ENST00000423100 988 ntTSL 2 BASIC16.42■□□□□ 0.22
SSNA1O43805 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
SSNA1O43805 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC16.42■□□□□ 0.22
SSNA1O43805 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC16.42■□□□□ 0.22
SSNA1O43805 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC16.42■□□□□ 0.22
SSNA1O43805 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC16.42■□□□□ 0.22
SSNA1O43805 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC16.42■□□□□ 0.22
SSNA1O43805 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
SSNA1O43805 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
SSNA1O43805 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC16.42■□□□□ 0.22
SSNA1O43805 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
SSNA1O43805 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC16.42■□□□□ 0.22
SSNA1O43805 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
SSNA1O43805 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC16.42■□□□□ 0.22
SSNA1O43805 FP475955.4-201ENST00000623131 1990 ntBASIC16.42■□□□□ 0.22
SSNA1O43805 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
SSNA1O43805 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
SSNA1O43805 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
SSNA1O43805 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
SSNA1O43805 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
SSNA1O43805 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
SSNA1O43805 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
SSNA1O43805 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC16.42■□□□□ 0.22
SSNA1O43805 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SSNA1O43805 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
SSNA1O43805 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SSNA1O43805 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SSNA1O43805 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC16.41■□□□□ 0.22
SSNA1O43805 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC16.41■□□□□ 0.22
SSNA1O43805 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
SSNA1O43805 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SSNA1O43805 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
SSNA1O43805 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
SSNA1O43805 EML3-212ENST00000494176 2901 ntTSL 2 BASIC16.41■□□□□ 0.22
SSNA1O43805 EML3-216ENST00000529309 2909 ntTSL 2 BASIC16.41■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms