Protein–RNA interactions for Protein: O00526

UPK2, Uroplakin-2, humanhuman

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK2O00526 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
UPK2O00526 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC15.49■□□□□ 0.07
UPK2O00526 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
UPK2O00526 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC15.49■□□□□ 0.07
UPK2O00526 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC15.49■□□□□ 0.07
UPK2O00526 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC15.49■□□□□ 0.07
UPK2O00526 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC15.49■□□□□ 0.07
UPK2O00526 AL121829.2-201ENST00000620908 328 ntBASIC15.49■□□□□ 0.07
UPK2O00526 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
UPK2O00526 SDHAP1-207ENST00000440850 2000 ntBASIC15.49■□□□□ 0.07
UPK2O00526 AL138781.2-201ENST00000617896 1843 ntBASIC15.49■□□□□ 0.07
UPK2O00526 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
UPK2O00526 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
UPK2O00526 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
UPK2O00526 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
UPK2O00526 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
UPK2O00526 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
UPK2O00526 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
UPK2O00526 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
UPK2O00526 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
UPK2O00526 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC15.48■□□□□ 0.07
UPK2O00526 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
UPK2O00526 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
UPK2O00526 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
UPK2O00526 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
UPK2O00526 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC15.48■□□□□ 0.07
UPK2O00526 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
UPK2O00526 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
UPK2O00526 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
UPK2O00526 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC15.48■□□□□ 0.07
UPK2O00526 TUBB8P6-201ENST00000436895 1288 ntBASIC15.48■□□□□ 0.07
UPK2O00526 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC15.48■□□□□ 0.07
UPK2O00526 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC15.48■□□□□ 0.07
UPK2O00526 KRT18P16-201ENST00000510337 1294 ntBASIC15.48■□□□□ 0.07
UPK2O00526 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC15.48■□□□□ 0.07
UPK2O00526 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
UPK2O00526 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
UPK2O00526 CROCCP3-202ENST00000420820 1947 ntBASIC15.48■□□□□ 0.07
UPK2O00526 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
UPK2O00526 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
UPK2O00526 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC15.48■□□□□ 0.07
UPK2O00526 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC15.48■□□□□ 0.07
UPK2O00526 AC138932.1-201ENST00000534164 6830 ntBASIC15.48■□□□□ 0.07
UPK2O00526 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC15.48■□□□□ 0.07
UPK2O00526 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
UPK2O00526 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC15.48■□□□□ 0.07
UPK2O00526 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
UPK2O00526 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC15.48■□□□□ 0.07
UPK2O00526 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC15.48■□□□□ 0.07
UPK2O00526 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
UPK2O00526 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
UPK2O00526 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
UPK2O00526 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
UPK2O00526 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
UPK2O00526 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC15.47■□□□□ 0.07
UPK2O00526 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC15.47■□□□□ 0.07
UPK2O00526 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC15.47■□□□□ 0.07
UPK2O00526 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
UPK2O00526 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
UPK2O00526 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
UPK2O00526 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
UPK2O00526 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
UPK2O00526 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
UPK2O00526 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
UPK2O00526 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC15.47■□□□□ 0.07
UPK2O00526 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC15.47■□□□□ 0.07
UPK2O00526 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC15.47■□□□□ 0.07
UPK2O00526 TK2-208ENST00000545043 1120 ntTSL 2 BASIC15.47■□□□□ 0.07
UPK2O00526 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC15.47■□□□□ 0.07
UPK2O00526 AL138781.1-201ENST00000566567 1274 ntBASIC15.47■□□□□ 0.07
UPK2O00526 AC083880.1-201ENST00000608266 535 ntBASIC15.47■□□□□ 0.07
UPK2O00526 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC15.47■□□□□ 0.07
UPK2O00526 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
UPK2O00526 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC15.47■□□□□ 0.07
UPK2O00526 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
UPK2O00526 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
UPK2O00526 AC006333.2-201ENST00000607957 2099 ntBASIC15.47■□□□□ 0.07
UPK2O00526 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC15.47■□□□□ 0.07
UPK2O00526 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC15.47■□□□□ 0.07
UPK2O00526 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
UPK2O00526 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
UPK2O00526 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
UPK2O00526 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
UPK2O00526 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC15.46■□□□□ 0.07
UPK2O00526 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC15.46■□□□□ 0.07
UPK2O00526 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.07
UPK2O00526 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
UPK2O00526 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
UPK2O00526 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
UPK2O00526 TREX2-204ENST00000370212 861 ntTSL 5 BASIC15.46■□□□□ 0.07
UPK2O00526 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.07
UPK2O00526 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC15.46■□□□□ 0.07
UPK2O00526 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC15.46■□□□□ 0.07
UPK2O00526 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
UPK2O00526 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC15.46■□□□□ 0.07
UPK2O00526 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
UPK2O00526 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC15.46■□□□□ 0.07
UPK2O00526 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
UPK2O00526 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC15.46■□□□□ 0.07
UPK2O00526 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC15.46■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 53.8 ms