Protein–RNA interactions for Protein: O00268

TAF4, Transcription initiation factor TFIID subunit 4, humanhuman

Predictions only

Length 1,085 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TAF4O00268 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC18.89■□□□□ 0.61
TAF4O00268 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC18.89■□□□□ 0.61
TAF4O00268 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC18.89■□□□□ 0.61
TAF4O00268 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
TAF4O00268 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC18.89■□□□□ 0.61
TAF4O00268 IER3-202ENST00000376377 1350 ntBASIC18.89■□□□□ 0.61
TAF4O00268 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
TAF4O00268 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC18.89■□□□□ 0.61
TAF4O00268 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
TAF4O00268 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
TAF4O00268 STX5-203ENST00000394690 1568 ntTSL 5 BASIC18.89■□□□□ 0.61
TAF4O00268 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
TAF4O00268 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
TAF4O00268 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
TAF4O00268 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC18.89■□□□□ 0.61
TAF4O00268 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
TAF4O00268 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC18.88■□□□□ 0.61
TAF4O00268 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
TAF4O00268 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TAF4O00268 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
TAF4O00268 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TAF4O00268 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
TAF4O00268 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC18.88■□□□□ 0.61
TAF4O00268 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TAF4O00268 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
TAF4O00268 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
TAF4O00268 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC18.88■□□□□ 0.61
TAF4O00268 TSPY5P-201ENST00000426936 936 ntBASIC18.88■□□□□ 0.61
TAF4O00268 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC18.88■□□□□ 0.61
TAF4O00268 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
TAF4O00268 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC18.88■□□□□ 0.61
TAF4O00268 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC18.88■□□□□ 0.61
TAF4O00268 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC18.88■□□□□ 0.61
TAF4O00268 GRAMD4P8-201ENST00000605465 1115 ntBASIC18.88■□□□□ 0.61
TAF4O00268 NDUFV2-AS1-203ENST00000608008 779 ntBASIC18.88■□□□□ 0.61
TAF4O00268 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC18.88■□□□□ 0.61
TAF4O00268 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC18.88■□□□□ 0.61
TAF4O00268 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC18.88■□□□□ 0.61
TAF4O00268 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
TAF4O00268 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
TAF4O00268 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TAF4O00268 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
TAF4O00268 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
TAF4O00268 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC18.88■□□□□ 0.61
TAF4O00268 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC18.88■□□□□ 0.61
TAF4O00268 AP005212.1-201ENST00000581547 1997 ntBASIC18.88■□□□□ 0.61
TAF4O00268 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC18.88■□□□□ 0.61
TAF4O00268 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC18.88■□□□□ 0.61
TAF4O00268 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TAF4O00268 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
TAF4O00268 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TAF4O00268 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
TAF4O00268 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
TAF4O00268 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
TAF4O00268 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
TAF4O00268 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
TAF4O00268 BET1L-202ENST00000332865 533 ntTSL 5 BASIC18.87■□□□□ 0.61
TAF4O00268 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
TAF4O00268 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC18.87■□□□□ 0.61
TAF4O00268 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC18.87■□□□□ 0.61
TAF4O00268 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
TAF4O00268 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
TAF4O00268 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC18.87■□□□□ 0.61
TAF4O00268 AC246785.2-201ENST00000432512 513 ntBASIC18.87■□□□□ 0.61
TAF4O00268 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC18.87■□□□□ 0.61
TAF4O00268 PVRIG2P-201ENST00000435460 978 ntBASIC18.87■□□□□ 0.61
TAF4O00268 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC18.87■□□□□ 0.61
TAF4O00268 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC18.87■□□□□ 0.61
TAF4O00268 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC18.87■□□□□ 0.61
TAF4O00268 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
TAF4O00268 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
TAF4O00268 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
TAF4O00268 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC18.87■□□□□ 0.61
TAF4O00268 AP005242.2-201ENST00000580065 1175 ntBASIC18.87■□□□□ 0.61
TAF4O00268 AC023511.2-201ENST00000618803 211 ntBASIC18.87■□□□□ 0.61
TAF4O00268 AL138966.2-201ENST00000621997 464 ntBASIC18.87■□□□□ 0.61
TAF4O00268 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC18.87■□□□□ 0.61
TAF4O00268 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC18.87■□□□□ 0.61
TAF4O00268 AL121956.5-201ENST00000625261 221 ntBASIC18.87■□□□□ 0.61
TAF4O00268 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC18.87■□□□□ 0.61
TAF4O00268 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
TAF4O00268 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TAF4O00268 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TAF4O00268 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
TAF4O00268 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TAF4O00268 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
TAF4O00268 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
TAF4O00268 BX323043.1-201ENST00000641006 1765 ntBASIC18.86■□□□□ 0.61
TAF4O00268 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
TAF4O00268 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC18.86■□□□□ 0.61
TAF4O00268 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
TAF4O00268 AC128688.1-201ENST00000487626 519 ntBASIC18.86■□□□□ 0.61
TAF4O00268 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC18.86■□□□□ 0.61
TAF4O00268 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
TAF4O00268 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC18.86■□□□□ 0.61
TAF4O00268 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC18.86■□□□□ 0.61
TAF4O00268 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC18.86■□□□□ 0.61
TAF4O00268 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
TAF4O00268 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
TAF4O00268 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms