Protein–RNA interactions for Protein: A6NLX3

SPDYE4, Speedy protein E4, humanhuman

Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPDYE4A6NLX3 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC21.67■■□□□ 1.06
SPDYE4A6NLX3 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC21.67■■□□□ 1.06
SPDYE4A6NLX3 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
SPDYE4A6NLX3 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC21.67■■□□□ 1.06
SPDYE4A6NLX3 AC007225.1-201ENST00000566331 1836 ntBASIC21.67■■□□□ 1.06
SPDYE4A6NLX3 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
SPDYE4A6NLX3 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
SPDYE4A6NLX3 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
SPDYE4A6NLX3 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC21.67■■□□□ 1.06
SPDYE4A6NLX3 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
SPDYE4A6NLX3 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC21.67■■□□□ 1.06
SPDYE4A6NLX3 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC21.67■■□□□ 1.06
SPDYE4A6NLX3 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
SPDYE4A6NLX3 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC21.67■■□□□ 1.06
SPDYE4A6NLX3 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
SPDYE4A6NLX3 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC21.67■■□□□ 1.06
SPDYE4A6NLX3 LINC01670-203ENST00000624859 977 ntTSL 3 BASIC21.67■■□□□ 1.06
SPDYE4A6NLX3 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC21.67■■□□□ 1.06
SPDYE4A6NLX3 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC21.67■■□□□ 1.06
SPDYE4A6NLX3 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC21.67■■□□□ 1.06
SPDYE4A6NLX3 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC21.66■■□□□ 1.06
SPDYE4A6NLX3 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
SPDYE4A6NLX3 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
SPDYE4A6NLX3 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC21.66■■□□□ 1.06
SPDYE4A6NLX3 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
SPDYE4A6NLX3 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC21.66■■□□□ 1.06
SPDYE4A6NLX3 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
SPDYE4A6NLX3 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC21.66■■□□□ 1.06
SPDYE4A6NLX3 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
SPDYE4A6NLX3 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
SPDYE4A6NLX3 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
SPDYE4A6NLX3 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC21.66■■□□□ 1.06
SPDYE4A6NLX3 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC21.66■■□□□ 1.06
SPDYE4A6NLX3 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC21.66■■□□□ 1.06
SPDYE4A6NLX3 C2orf69P4-201ENST00000565394 541 ntBASIC21.66■■□□□ 1.06
SPDYE4A6NLX3 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
SPDYE4A6NLX3 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC21.66■■□□□ 1.06
SPDYE4A6NLX3 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC21.66■■□□□ 1.06
SPDYE4A6NLX3 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC21.66■■□□□ 1.06
SPDYE4A6NLX3 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC21.66■■□□□ 1.06
SPDYE4A6NLX3 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC21.66■■□□□ 1.06
SPDYE4A6NLX3 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
SPDYE4A6NLX3 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
SPDYE4A6NLX3 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
SPDYE4A6NLX3 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
SPDYE4A6NLX3 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
SPDYE4A6NLX3 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
SPDYE4A6NLX3 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
SPDYE4A6NLX3 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
SPDYE4A6NLX3 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC21.65■■□□□ 1.06
SPDYE4A6NLX3 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC21.65■■□□□ 1.06
SPDYE4A6NLX3 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
SPDYE4A6NLX3 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
SPDYE4A6NLX3 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
SPDYE4A6NLX3 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
SPDYE4A6NLX3 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC21.65■■□□□ 1.06
SPDYE4A6NLX3 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC21.65■■□□□ 1.06
SPDYE4A6NLX3 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
SPDYE4A6NLX3 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC21.65■■□□□ 1.06
SPDYE4A6NLX3 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
SPDYE4A6NLX3 TCF3P1-201ENST00000423021 1937 ntBASIC21.65■■□□□ 1.06
SPDYE4A6NLX3 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
SPDYE4A6NLX3 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC21.65■■□□□ 1.06
SPDYE4A6NLX3 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
SPDYE4A6NLX3 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
SPDYE4A6NLX3 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
SPDYE4A6NLX3 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
SPDYE4A6NLX3 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
SPDYE4A6NLX3 ISG20-202ENST00000379224 540 ntTSL 3 BASIC21.65■■□□□ 1.06
SPDYE4A6NLX3 GGT1-206ENST00000404223 952 ntTSL 2 BASIC21.65■■□□□ 1.06
SPDYE4A6NLX3 PGM5P4-201ENST00000421970 445 ntBASIC21.65■■□□□ 1.06
SPDYE4A6NLX3 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC21.65■■□□□ 1.06
SPDYE4A6NLX3 AP000240.1-201ENST00000609910 452 ntBASIC21.65■■□□□ 1.06
SPDYE4A6NLX3 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
SPDYE4A6NLX3 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
SPDYE4A6NLX3 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
SPDYE4A6NLX3 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
SPDYE4A6NLX3 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
SPDYE4A6NLX3 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
SPDYE4A6NLX3 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC21.65■■□□□ 1.06
SPDYE4A6NLX3 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC21.65■■□□□ 1.06
SPDYE4A6NLX3 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC21.65■■□□□ 1.06
SPDYE4A6NLX3 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
SPDYE4A6NLX3 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC21.65■■□□□ 1.06
SPDYE4A6NLX3 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
SPDYE4A6NLX3 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
SPDYE4A6NLX3 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC21.64■■□□□ 1.06
SPDYE4A6NLX3 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC21.64■■□□□ 1.06
SPDYE4A6NLX3 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
SPDYE4A6NLX3 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
SPDYE4A6NLX3 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC21.64■■□□□ 1.06
SPDYE4A6NLX3 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC21.64■■□□□ 1.06
SPDYE4A6NLX3 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
SPDYE4A6NLX3 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC21.64■■□□□ 1.06
SPDYE4A6NLX3 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC21.64■■□□□ 1.06
SPDYE4A6NLX3 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC21.64■■□□□ 1.05
SPDYE4A6NLX3 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
SPDYE4A6NLX3 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC21.64■■□□□ 1.05
SPDYE4A6NLX3 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC21.64■■□□□ 1.05
SPDYE4A6NLX3 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 16.8 ms