Protein–RNA interactions for Protein: A6NGU7

LINC01546, Putative uncharacterized protein encoded by LINC01546, humanhuman

Predictions only

Length 62 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01546A6NGU7 AC018553.1-201ENST00000616682 1458 ntBASIC13.65□□□□□ -0.22
LINC01546A6NGU7 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
LINC01546A6NGU7 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
LINC01546A6NGU7 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
LINC01546A6NGU7 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
LINC01546A6NGU7 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
LINC01546A6NGU7 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC13.65□□□□□ -0.22
LINC01546A6NGU7 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
LINC01546A6NGU7 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
LINC01546A6NGU7 AC104417.2-201ENST00000562989 1793 ntBASIC13.65□□□□□ -0.22
LINC01546A6NGU7 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC13.65□□□□□ -0.22
LINC01546A6NGU7 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
LINC01546A6NGU7 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.23
LINC01546A6NGU7 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC13.64□□□□□ -0.23
LINC01546A6NGU7 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
LINC01546A6NGU7 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC13.64□□□□□ -0.23
LINC01546A6NGU7 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
LINC01546A6NGU7 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
LINC01546A6NGU7 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC13.64□□□□□ -0.23
LINC01546A6NGU7 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC13.64□□□□□ -0.23
LINC01546A6NGU7 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
LINC01546A6NGU7 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC13.64□□□□□ -0.23
LINC01546A6NGU7 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
LINC01546A6NGU7 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
LINC01546A6NGU7 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC13.64□□□□□ -0.23
LINC01546A6NGU7 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
LINC01546A6NGU7 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
LINC01546A6NGU7 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
LINC01546A6NGU7 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
LINC01546A6NGU7 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
LINC01546A6NGU7 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC13.64□□□□□ -0.23
LINC01546A6NGU7 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC13.64□□□□□ -0.23
LINC01546A6NGU7 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
LINC01546A6NGU7 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
LINC01546A6NGU7 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
LINC01546A6NGU7 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
LINC01546A6NGU7 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC13.64□□□□□ -0.23
LINC01546A6NGU7 GUSBP5-201ENST00000418136 578 ntBASIC13.64□□□□□ -0.23
LINC01546A6NGU7 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
LINC01546A6NGU7 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
LINC01546A6NGU7 AC023632.3-201ENST00000521633 145 ntBASIC13.64□□□□□ -0.23
LINC01546A6NGU7 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC13.64□□□□□ -0.23
LINC01546A6NGU7 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
LINC01546A6NGU7 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
LINC01546A6NGU7 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC13.64□□□□□ -0.23
LINC01546A6NGU7 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
LINC01546A6NGU7 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
LINC01546A6NGU7 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
LINC01546A6NGU7 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC13.64□□□□□ -0.23
LINC01546A6NGU7 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
LINC01546A6NGU7 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC13.64□□□□□ -0.23
LINC01546A6NGU7 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC13.64□□□□□ -0.23
LINC01546A6NGU7 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC13.63□□□□□ -0.23
LINC01546A6NGU7 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC13.63□□□□□ -0.23
LINC01546A6NGU7 AC116351.2-201ENST00000606540 1585 ntBASIC13.63□□□□□ -0.23
LINC01546A6NGU7 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
LINC01546A6NGU7 SDHAP1-207ENST00000440850 2000 ntBASIC13.63□□□□□ -0.23
LINC01546A6NGU7 GAS2L1P2-201ENST00000436355 1356 ntBASIC13.63□□□□□ -0.23
LINC01546A6NGU7 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC13.63□□□□□ -0.23
LINC01546A6NGU7 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC13.63□□□□□ -0.23
LINC01546A6NGU7 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC13.63□□□□□ -0.23
LINC01546A6NGU7 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
LINC01546A6NGU7 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
LINC01546A6NGU7 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC13.63□□□□□ -0.23
LINC01546A6NGU7 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
LINC01546A6NGU7 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
LINC01546A6NGU7 AC131281.2-201ENST00000520478 145 ntBASIC13.63□□□□□ -0.23
LINC01546A6NGU7 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC13.63□□□□□ -0.23
LINC01546A6NGU7 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC13.63□□□□□ -0.23
LINC01546A6NGU7 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
LINC01546A6NGU7 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC13.63□□□□□ -0.23
LINC01546A6NGU7 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
LINC01546A6NGU7 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC13.63□□□□□ -0.23
LINC01546A6NGU7 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC13.63□□□□□ -0.23
LINC01546A6NGU7 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
LINC01546A6NGU7 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC13.62□□□□□ -0.23
LINC01546A6NGU7 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
LINC01546A6NGU7 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
LINC01546A6NGU7 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC13.62□□□□□ -0.23
LINC01546A6NGU7 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
LINC01546A6NGU7 GNE-204ENST00000539208 2190 ntTSL 2 BASIC13.62□□□□□ -0.23
LINC01546A6NGU7 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
LINC01546A6NGU7 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
LINC01546A6NGU7 FZD10-202ENST00000539839 3282 ntBASIC13.62□□□□□ -0.23
LINC01546A6NGU7 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
LINC01546A6NGU7 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
LINC01546A6NGU7 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
LINC01546A6NGU7 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC13.62□□□□□ -0.23
LINC01546A6NGU7 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
LINC01546A6NGU7 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
LINC01546A6NGU7 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC13.62□□□□□ -0.23
LINC01546A6NGU7 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC13.62□□□□□ -0.23
LINC01546A6NGU7 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC13.62□□□□□ -0.23
LINC01546A6NGU7 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC13.62□□□□□ -0.23
LINC01546A6NGU7 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC13.62□□□□□ -0.23
LINC01546A6NGU7 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC13.62□□□□□ -0.23
LINC01546A6NGU7 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
LINC01546A6NGU7 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
LINC01546A6NGU7 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC13.62□□□□□ -0.23
LINC01546A6NGU7 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 20.3 ms