Protein–RNA interactions for Protein: A0A075B6P5

IGKV2-28, Immunoglobulin kappa variable 2-28, humanhuman

Predictions only

Length 120 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGKV2-28A0A075B6P5 KRT19P1-201ENST00000405746 1186 ntBASIC12.77□□□□□ -0.37
IGKV2-28A0A075B6P5 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
IGKV2-28A0A075B6P5 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC12.77□□□□□ -0.37
IGKV2-28A0A075B6P5 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC12.77□□□□□ -0.37
IGKV2-28A0A075B6P5 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
IGKV2-28A0A075B6P5 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
IGKV2-28A0A075B6P5 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
IGKV2-28A0A075B6P5 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
IGKV2-28A0A075B6P5 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC12.77□□□□□ -0.37
IGKV2-28A0A075B6P5 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
IGKV2-28A0A075B6P5 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
IGKV2-28A0A075B6P5 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
IGKV2-28A0A075B6P5 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC12.76□□□□□ -0.37
IGKV2-28A0A075B6P5 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
IGKV2-28A0A075B6P5 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
IGKV2-28A0A075B6P5 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
IGKV2-28A0A075B6P5 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC12.76□□□□□ -0.37
IGKV2-28A0A075B6P5 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
IGKV2-28A0A075B6P5 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
IGKV2-28A0A075B6P5 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
IGKV2-28A0A075B6P5 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
IGKV2-28A0A075B6P5 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
IGKV2-28A0A075B6P5 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
IGKV2-28A0A075B6P5 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
IGKV2-28A0A075B6P5 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
IGKV2-28A0A075B6P5 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC12.76□□□□□ -0.37
IGKV2-28A0A075B6P5 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC12.76□□□□□ -0.37
IGKV2-28A0A075B6P5 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC12.76□□□□□ -0.37
IGKV2-28A0A075B6P5 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
IGKV2-28A0A075B6P5 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC12.76□□□□□ -0.37
IGKV2-28A0A075B6P5 LGR4-203ENST00000480977 492 ntTSL 2 BASIC12.76□□□□□ -0.37
IGKV2-28A0A075B6P5 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC12.76□□□□□ -0.37
IGKV2-28A0A075B6P5 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC12.76□□□□□ -0.37
IGKV2-28A0A075B6P5 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC12.76□□□□□ -0.37
IGKV2-28A0A075B6P5 UBE2DNL-204ENST00000602536 740 ntBASIC12.76□□□□□ -0.37
IGKV2-28A0A075B6P5 AC243732.1-201ENST00000612648 864 ntBASIC12.76□□□□□ -0.37
IGKV2-28A0A075B6P5 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
IGKV2-28A0A075B6P5 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
IGKV2-28A0A075B6P5 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
IGKV2-28A0A075B6P5 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC12.76□□□□□ -0.37
IGKV2-28A0A075B6P5 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
IGKV2-28A0A075B6P5 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC12.76□□□□□ -0.37
IGKV2-28A0A075B6P5 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
IGKV2-28A0A075B6P5 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC12.76□□□□□ -0.37
IGKV2-28A0A075B6P5 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC12.76□□□□□ -0.37
IGKV2-28A0A075B6P5 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
IGKV2-28A0A075B6P5 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC12.76□□□□□ -0.37
IGKV2-28A0A075B6P5 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC12.76□□□□□ -0.37
IGKV2-28A0A075B6P5 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
IGKV2-28A0A075B6P5 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC12.76□□□□□ -0.37
IGKV2-28A0A075B6P5 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC12.76□□□□□ -0.37
IGKV2-28A0A075B6P5 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
IGKV2-28A0A075B6P5 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
IGKV2-28A0A075B6P5 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
IGKV2-28A0A075B6P5 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
IGKV2-28A0A075B6P5 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
IGKV2-28A0A075B6P5 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
IGKV2-28A0A075B6P5 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
IGKV2-28A0A075B6P5 HR-201ENST00000312841 5351 ntTSL 5 BASIC12.75□□□□□ -0.37
IGKV2-28A0A075B6P5 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
IGKV2-28A0A075B6P5 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
IGKV2-28A0A075B6P5 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
IGKV2-28A0A075B6P5 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
IGKV2-28A0A075B6P5 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
IGKV2-28A0A075B6P5 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC12.75□□□□□ -0.37
IGKV2-28A0A075B6P5 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC12.75□□□□□ -0.37
IGKV2-28A0A075B6P5 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC12.75□□□□□ -0.37
IGKV2-28A0A075B6P5 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
IGKV2-28A0A075B6P5 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
IGKV2-28A0A075B6P5 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC12.75□□□□□ -0.37
IGKV2-28A0A075B6P5 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
IGKV2-28A0A075B6P5 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
IGKV2-28A0A075B6P5 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
IGKV2-28A0A075B6P5 PTBP1P-201ENST00000554374 1601 ntBASIC12.75□□□□□ -0.37
IGKV2-28A0A075B6P5 EFTUD1P1-204ENST00000560401 1798 ntBASIC12.75□□□□□ -0.37
IGKV2-28A0A075B6P5 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC12.75□□□□□ -0.37
IGKV2-28A0A075B6P5 GALNS-213ENST00000569433 723 ntTSL 3 BASIC12.75□□□□□ -0.37
IGKV2-28A0A075B6P5 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC12.75□□□□□ -0.37
IGKV2-28A0A075B6P5 AC019069.1-201ENST00000610008 1333 ntBASIC12.75□□□□□ -0.37
IGKV2-28A0A075B6P5 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
IGKV2-28A0A075B6P5 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC12.75□□□□□ -0.37
IGKV2-28A0A075B6P5 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC12.75□□□□□ -0.37
IGKV2-28A0A075B6P5 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
IGKV2-28A0A075B6P5 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
IGKV2-28A0A075B6P5 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
IGKV2-28A0A075B6P5 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
IGKV2-28A0A075B6P5 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
IGKV2-28A0A075B6P5 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC12.75□□□□□ -0.37
IGKV2-28A0A075B6P5 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC12.74□□□□□ -0.37
IGKV2-28A0A075B6P5 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
IGKV2-28A0A075B6P5 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC12.74□□□□□ -0.37
IGKV2-28A0A075B6P5 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC12.74□□□□□ -0.37
IGKV2-28A0A075B6P5 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
IGKV2-28A0A075B6P5 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
IGKV2-28A0A075B6P5 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
IGKV2-28A0A075B6P5 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
IGKV2-28A0A075B6P5 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
IGKV2-28A0A075B6P5 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC12.74□□□□□ -0.37
IGKV2-28A0A075B6P5 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC12.74□□□□□ -0.37
IGKV2-28A0A075B6P5 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 46.5 ms