Protein–RNA interactions for Protein: Q9Y3C5

RNF11, RING finger protein 11, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF11Q9Y3C5 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
RNF11Q9Y3C5 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
RNF11Q9Y3C5 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
RNF11Q9Y3C5 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
RNF11Q9Y3C5 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
RNF11Q9Y3C5 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
RNF11Q9Y3C5 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
RNF11Q9Y3C5 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
RNF11Q9Y3C5 PNN-205ENST00000556530 601 ntTSL 2 BASIC18.85■□□□□ 0.61
RNF11Q9Y3C5 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
RNF11Q9Y3C5 KLF2-202ENST00000592003 564 ntTSL 3 BASIC18.85■□□□□ 0.61
RNF11Q9Y3C5 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC18.85■□□□□ 0.61
RNF11Q9Y3C5 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
RNF11Q9Y3C5 INO80E-214ENST00000620599 515 ntTSL 2 BASIC18.85■□□□□ 0.61
RNF11Q9Y3C5 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC18.85■□□□□ 0.61
RNF11Q9Y3C5 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC18.85■□□□□ 0.61
RNF11Q9Y3C5 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
RNF11Q9Y3C5 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC18.85■□□□□ 0.61
RNF11Q9Y3C5 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
RNF11Q9Y3C5 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
RNF11Q9Y3C5 GOLGA6L3-201ENST00000507199 1679 ntBASIC18.85■□□□□ 0.61
RNF11Q9Y3C5 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
RNF11Q9Y3C5 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
RNF11Q9Y3C5 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
RNF11Q9Y3C5 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
RNF11Q9Y3C5 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
RNF11Q9Y3C5 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC18.84■□□□□ 0.61
RNF11Q9Y3C5 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
RNF11Q9Y3C5 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
RNF11Q9Y3C5 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
RNF11Q9Y3C5 ADK-206ENST00000541550 2222 ntTSL 2 BASIC18.84■□□□□ 0.61
RNF11Q9Y3C5 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
RNF11Q9Y3C5 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
RNF11Q9Y3C5 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
RNF11Q9Y3C5 AL355802.2-201ENST00000402069 882 ntBASIC18.84■□□□□ 0.61
RNF11Q9Y3C5 HLA-L-209ENST00000420110 1011 ntBASIC18.84■□□□□ 0.61
RNF11Q9Y3C5 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC18.84■□□□□ 0.61
RNF11Q9Y3C5 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC18.84■□□□□ 0.61
RNF11Q9Y3C5 MAX-217ENST00000557277 728 ntTSL 3 BASIC18.84■□□□□ 0.61
RNF11Q9Y3C5 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
RNF11Q9Y3C5 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC18.84■□□□□ 0.61
RNF11Q9Y3C5 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
RNF11Q9Y3C5 AL121906.2-201ENST00000621597 723 ntBASIC18.84■□□□□ 0.61
RNF11Q9Y3C5 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
RNF11Q9Y3C5 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
RNF11Q9Y3C5 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
RNF11Q9Y3C5 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC18.84■□□□□ 0.61
RNF11Q9Y3C5 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC18.84■□□□□ 0.61
RNF11Q9Y3C5 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
RNF11Q9Y3C5 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.61
RNF11Q9Y3C5 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.61
RNF11Q9Y3C5 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
RNF11Q9Y3C5 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC18.83■□□□□ 0.61
RNF11Q9Y3C5 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
RNF11Q9Y3C5 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
RNF11Q9Y3C5 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.61
RNF11Q9Y3C5 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
RNF11Q9Y3C5 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
RNF11Q9Y3C5 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
RNF11Q9Y3C5 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
RNF11Q9Y3C5 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC18.83■□□□□ 0.6
RNF11Q9Y3C5 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC18.83■□□□□ 0.6
RNF11Q9Y3C5 RGMA-211ENST00000557420 989 ntTSL 3 BASIC18.83■□□□□ 0.6
RNF11Q9Y3C5 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
RNF11Q9Y3C5 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC18.83■□□□□ 0.6
RNF11Q9Y3C5 AC008687.6-201ENST00000596318 630 ntBASIC18.83■□□□□ 0.6
RNF11Q9Y3C5 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC18.83■□□□□ 0.6
RNF11Q9Y3C5 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
RNF11Q9Y3C5 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC18.83■□□□□ 0.6
RNF11Q9Y3C5 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
RNF11Q9Y3C5 AP006587.1-201ENST00000534129 1502 ntBASIC18.83■□□□□ 0.6
RNF11Q9Y3C5 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
RNF11Q9Y3C5 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
RNF11Q9Y3C5 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
RNF11Q9Y3C5 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
RNF11Q9Y3C5 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
RNF11Q9Y3C5 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
RNF11Q9Y3C5 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
RNF11Q9Y3C5 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC18.82■□□□□ 0.6
RNF11Q9Y3C5 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
RNF11Q9Y3C5 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
RNF11Q9Y3C5 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
RNF11Q9Y3C5 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC18.82■□□□□ 0.6
RNF11Q9Y3C5 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
RNF11Q9Y3C5 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC18.82■□□□□ 0.6
RNF11Q9Y3C5 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC18.82■□□□□ 0.6
RNF11Q9Y3C5 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
RNF11Q9Y3C5 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
RNF11Q9Y3C5 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
RNF11Q9Y3C5 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
RNF11Q9Y3C5 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
RNF11Q9Y3C5 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
RNF11Q9Y3C5 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC18.82■□□□□ 0.6
RNF11Q9Y3C5 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
RNF11Q9Y3C5 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC18.82■□□□□ 0.6
RNF11Q9Y3C5 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
RNF11Q9Y3C5 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
RNF11Q9Y3C5 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
RNF11Q9Y3C5 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC18.82■□□□□ 0.6
RNF11Q9Y3C5 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms