Protein–RNA interactions for Protein: Q9UKN5

PRDM4, PR domain zinc finger protein 4, humanhuman

Predictions only

Length 801 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM4Q9UKN5 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
PRDM4Q9UKN5 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC19.95■□□□□ 0.78
PRDM4Q9UKN5 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
PRDM4Q9UKN5 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
PRDM4Q9UKN5 AC004687.1-201ENST00000579003 1625 ntBASIC19.95■□□□□ 0.78
PRDM4Q9UKN5 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
PRDM4Q9UKN5 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
PRDM4Q9UKN5 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
PRDM4Q9UKN5 AC008741.2-201ENST00000612792 3115 ntBASIC19.95■□□□□ 0.78
PRDM4Q9UKN5 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
PRDM4Q9UKN5 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
PRDM4Q9UKN5 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC19.95■□□□□ 0.78
PRDM4Q9UKN5 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
PRDM4Q9UKN5 MIR4466-201ENST00000606121 54 ntBASIC19.95■□□□□ 0.78
PRDM4Q9UKN5 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC19.95■□□□□ 0.78
PRDM4Q9UKN5 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC19.95■□□□□ 0.78
PRDM4Q9UKN5 CYP51A1-201ENST00000003100 3210 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
PRDM4Q9UKN5 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
PRDM4Q9UKN5 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC19.95■□□□□ 0.78
PRDM4Q9UKN5 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC19.95■□□□□ 0.78
PRDM4Q9UKN5 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
PRDM4Q9UKN5 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
PRDM4Q9UKN5 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
PRDM4Q9UKN5 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
PRDM4Q9UKN5 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC19.94■□□□□ 0.78
PRDM4Q9UKN5 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
PRDM4Q9UKN5 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC19.94■□□□□ 0.78
PRDM4Q9UKN5 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
PRDM4Q9UKN5 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
PRDM4Q9UKN5 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
PRDM4Q9UKN5 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
PRDM4Q9UKN5 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC19.94■□□□□ 0.78
PRDM4Q9UKN5 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
PRDM4Q9UKN5 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
PRDM4Q9UKN5 AGK-211ENST00000629555 2765 ntTSL 5 BASIC19.94■□□□□ 0.78
PRDM4Q9UKN5 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
PRDM4Q9UKN5 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
PRDM4Q9UKN5 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
PRDM4Q9UKN5 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
PRDM4Q9UKN5 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC19.94■□□□□ 0.78
PRDM4Q9UKN5 AC136469.2-201ENST00000623944 1028 ntBASIC19.94■□□□□ 0.78
PRDM4Q9UKN5 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
PRDM4Q9UKN5 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
PRDM4Q9UKN5 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
PRDM4Q9UKN5 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
PRDM4Q9UKN5 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
PRDM4Q9UKN5 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
PRDM4Q9UKN5 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
PRDM4Q9UKN5 LINC02199-201ENST00000506655 2702 ntBASIC19.94■□□□□ 0.78
PRDM4Q9UKN5 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
PRDM4Q9UKN5 AC134043.2-201ENST00000624206 2238 ntBASIC19.94■□□□□ 0.78
PRDM4Q9UKN5 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC19.94■□□□□ 0.78
PRDM4Q9UKN5 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
PRDM4Q9UKN5 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
PRDM4Q9UKN5 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
PRDM4Q9UKN5 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
PRDM4Q9UKN5 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
PRDM4Q9UKN5 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
PRDM4Q9UKN5 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
PRDM4Q9UKN5 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
PRDM4Q9UKN5 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
PRDM4Q9UKN5 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC19.93■□□□□ 0.78
PRDM4Q9UKN5 AC131281.2-201ENST00000520478 145 ntBASIC19.93■□□□□ 0.78
PRDM4Q9UKN5 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC19.93■□□□□ 0.78
PRDM4Q9UKN5 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
PRDM4Q9UKN5 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
PRDM4Q9UKN5 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC19.93■□□□□ 0.78
PRDM4Q9UKN5 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC19.93■□□□□ 0.78
PRDM4Q9UKN5 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC19.93■□□□□ 0.78
PRDM4Q9UKN5 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
PRDM4Q9UKN5 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
PRDM4Q9UKN5 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC19.93■□□□□ 0.78
PRDM4Q9UKN5 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
PRDM4Q9UKN5 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
PRDM4Q9UKN5 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC19.93■□□□□ 0.78
PRDM4Q9UKN5 HIPK4-201ENST00000291823 2452 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
PRDM4Q9UKN5 AL031598.1-201ENST00000561511 1773 ntBASIC19.93■□□□□ 0.78
PRDM4Q9UKN5 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC19.93■□□□□ 0.78
PRDM4Q9UKN5 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
PRDM4Q9UKN5 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC19.92■□□□□ 0.78
PRDM4Q9UKN5 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
PRDM4Q9UKN5 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
PRDM4Q9UKN5 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
PRDM4Q9UKN5 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
PRDM4Q9UKN5 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC19.92■□□□□ 0.78
PRDM4Q9UKN5 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC19.92■□□□□ 0.78
PRDM4Q9UKN5 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC19.92■□□□□ 0.78
PRDM4Q9UKN5 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC19.92■□□□□ 0.78
PRDM4Q9UKN5 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC19.92■□□□□ 0.78
PRDM4Q9UKN5 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC19.92■□□□□ 0.78
PRDM4Q9UKN5 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
PRDM4Q9UKN5 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
PRDM4Q9UKN5 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC19.92■□□□□ 0.78
PRDM4Q9UKN5 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC19.92■□□□□ 0.78
PRDM4Q9UKN5 AC006455.2-201ENST00000429931 906 ntBASIC19.92■□□□□ 0.78
PRDM4Q9UKN5 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC19.92■□□□□ 0.78
PRDM4Q9UKN5 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC19.92■□□□□ 0.78
PRDM4Q9UKN5 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC19.92■□□□□ 0.78
PRDM4Q9UKN5 AC087239.1-201ENST00000622671 572 ntBASIC19.92■□□□□ 0.78
PRDM4Q9UKN5 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 43.9 ms