Protein–RNA interactions for Protein: Q9H6U6

BCAS3, Breast carcinoma-amplified sequence 3, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BCAS3Q9H6U6 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC21.8■■□□□ 1.08
BCAS3Q9H6U6 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC21.8■■□□□ 1.08
BCAS3Q9H6U6 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
BCAS3Q9H6U6 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC21.8■■□□□ 1.08
BCAS3Q9H6U6 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
BCAS3Q9H6U6 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC21.79■■□□□ 1.08
BCAS3Q9H6U6 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
BCAS3Q9H6U6 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
BCAS3Q9H6U6 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
BCAS3Q9H6U6 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC21.79■■□□□ 1.08
BCAS3Q9H6U6 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC21.79■■□□□ 1.08
BCAS3Q9H6U6 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
BCAS3Q9H6U6 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC21.79■■□□□ 1.08
BCAS3Q9H6U6 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
BCAS3Q9H6U6 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
BCAS3Q9H6U6 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC21.79■■□□□ 1.08
BCAS3Q9H6U6 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
BCAS3Q9H6U6 FAM207BP-201ENST00000447172 505 ntBASIC21.79■■□□□ 1.08
BCAS3Q9H6U6 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC21.79■■□□□ 1.08
BCAS3Q9H6U6 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC21.79■■□□□ 1.08
BCAS3Q9H6U6 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC21.79■■□□□ 1.08
BCAS3Q9H6U6 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC21.79■■□□□ 1.08
BCAS3Q9H6U6 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC21.79■■□□□ 1.08
BCAS3Q9H6U6 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC21.79■■□□□ 1.08
BCAS3Q9H6U6 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC21.79■■□□□ 1.08
BCAS3Q9H6U6 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
BCAS3Q9H6U6 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
BCAS3Q9H6U6 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC21.79■■□□□ 1.08
BCAS3Q9H6U6 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC21.79■■□□□ 1.08
BCAS3Q9H6U6 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC21.79■■□□□ 1.08
BCAS3Q9H6U6 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC21.78■■□□□ 1.08
BCAS3Q9H6U6 TSPY14P-201ENST00000303979 915 ntBASIC21.78■■□□□ 1.08
BCAS3Q9H6U6 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC21.78■■□□□ 1.08
BCAS3Q9H6U6 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC21.78■■□□□ 1.08
BCAS3Q9H6U6 MFAP1P1-201ENST00000442257 1255 ntBASIC21.78■■□□□ 1.08
BCAS3Q9H6U6 AC104076.2-201ENST00000448912 469 ntBASIC21.78■■□□□ 1.08
BCAS3Q9H6U6 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC21.78■■□□□ 1.08
BCAS3Q9H6U6 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC21.78■■□□□ 1.08
BCAS3Q9H6U6 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC21.78■■□□□ 1.08
BCAS3Q9H6U6 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC21.78■■□□□ 1.08
BCAS3Q9H6U6 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC21.78■■□□□ 1.08
BCAS3Q9H6U6 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC21.78■■□□□ 1.08
BCAS3Q9H6U6 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
BCAS3Q9H6U6 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC21.78■■□□□ 1.08
BCAS3Q9H6U6 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
BCAS3Q9H6U6 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC21.77■■□□□ 1.08
BCAS3Q9H6U6 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC21.77■■□□□ 1.08
BCAS3Q9H6U6 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
BCAS3Q9H6U6 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
BCAS3Q9H6U6 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
BCAS3Q9H6U6 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
BCAS3Q9H6U6 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC21.77■■□□□ 1.08
BCAS3Q9H6U6 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC21.77■■□□□ 1.08
BCAS3Q9H6U6 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC21.77■■□□□ 1.08
BCAS3Q9H6U6 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC21.77■■□□□ 1.08
BCAS3Q9H6U6 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.08
BCAS3Q9H6U6 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC21.77■■□□□ 1.08
BCAS3Q9H6U6 AL445228.2-201ENST00000605589 952 ntBASIC21.77■■□□□ 1.08
BCAS3Q9H6U6 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
BCAS3Q9H6U6 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
BCAS3Q9H6U6 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC21.77■■□□□ 1.08
BCAS3Q9H6U6 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC21.77■■□□□ 1.08
BCAS3Q9H6U6 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.08
BCAS3Q9H6U6 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC21.77■■□□□ 1.07
BCAS3Q9H6U6 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC21.77■■□□□ 1.07
BCAS3Q9H6U6 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.07
BCAS3Q9H6U6 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC21.77■■□□□ 1.07
BCAS3Q9H6U6 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
BCAS3Q9H6U6 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
BCAS3Q9H6U6 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
BCAS3Q9H6U6 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
BCAS3Q9H6U6 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC21.76■■□□□ 1.07
BCAS3Q9H6U6 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
BCAS3Q9H6U6 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
BCAS3Q9H6U6 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC21.76■■□□□ 1.07
BCAS3Q9H6U6 DERL1-203ENST00000419562 918 ntTSL 2 BASIC21.76■■□□□ 1.07
BCAS3Q9H6U6 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
BCAS3Q9H6U6 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC21.76■■□□□ 1.07
BCAS3Q9H6U6 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC21.76■■□□□ 1.07
BCAS3Q9H6U6 EGLN1P1-201ENST00000531623 762 ntBASIC21.76■■□□□ 1.07
BCAS3Q9H6U6 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
BCAS3Q9H6U6 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
BCAS3Q9H6U6 FAM87A-204ENST00000613235 858 ntBASIC21.76■■□□□ 1.07
BCAS3Q9H6U6 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC21.76■■□□□ 1.07
BCAS3Q9H6U6 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC21.76■■□□□ 1.07
BCAS3Q9H6U6 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC21.75■■□□□ 1.07
BCAS3Q9H6U6 AC096733.2-201ENST00000609937 1394 ntBASIC21.75■■□□□ 1.07
BCAS3Q9H6U6 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
BCAS3Q9H6U6 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
BCAS3Q9H6U6 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC21.75■■□□□ 1.07
BCAS3Q9H6U6 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC21.75■■□□□ 1.07
BCAS3Q9H6U6 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC21.75■■□□□ 1.07
BCAS3Q9H6U6 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC21.75■■□□□ 1.07
BCAS3Q9H6U6 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC21.75■■□□□ 1.07
BCAS3Q9H6U6 AL137013.1-201ENST00000432946 1228 ntBASIC21.75■■□□□ 1.07
BCAS3Q9H6U6 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
BCAS3Q9H6U6 C2orf69P3-201ENST00000565542 1120 ntBASIC21.75■■□□□ 1.07
BCAS3Q9H6U6 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC21.75■■□□□ 1.07
BCAS3Q9H6U6 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
BCAS3Q9H6U6 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 49.9 ms