Protein–RNA interactions for Protein: Q9H0D6

XRN2, 5'-3' exoribonuclease 2, humanhuman

Known RBP eCLIP

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRN2Q9H0D6 MIER1-202ENST00000355977 3595 ntTSL 5 BASIC14.07□□□□□ -0.169e-8■■■■□ 20.3
XRN2Q9H0D6 MTRR-204ENST00000502550 567 ntTSL 413.96□□□□□ -0.178e-8■■■■□ 20.3
XRN2Q9H0D6 MIER1-207ENST00000371018 3875 ntTSL 1 (best) BASIC12.36□□□□□ -0.439e-8■■■■□ 20.3
XRN2Q9H0D6 MIER1-203ENST00000357692 4978 ntTSL 1 (best) BASIC11.9□□□□□ -0.59e-8■■■■□ 20.3
XRN2Q9H0D6 MTRR-203ENST00000502509 711 ntTSL 311.82□□□□□ -0.528e-8■■■■□ 20.3
XRN2Q9H0D6 MTRR-211ENST00000508047 535 ntTSL 410.9□□□□□ -0.668e-8■■■■□ 20.3
XRN2Q9H0D6 MTRR-201ENST00000264668 3274 ntTSL 1 (best) BASIC8.96□□□□□ -0.978e-8■■■■□ 20.3
XRN2Q9H0D6 MIER1-201ENST00000355356 4818 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.979e-8■■■■□ 20.3
XRN2Q9H0D6 MTRR-205ENST00000503550 556 ntTSL 58.67□□□□□ -1.028e-8■■■■□ 20.3
XRN2Q9H0D6 MTRR-225ENST00000514369 779 ntTSL 58.24□□□□□ -1.098e-8■■■■□ 20.3
XRN2Q9H0D6 MTRR-202ENST00000440940 3215 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.498e-8■■■■□ 20.3
XRN2Q9H0D6 MTRR-219ENST00000511461 3076 ntTSL 55.61□□□□□ -1.518e-8■■■■□ 20.3
XRN2Q9H0D6 PRPSAP1-205ENST00000442767 908 ntTSL 526.96■■□□□ 1.913e-6■■■■□ 20.3
XRN2Q9H0D6 PRPSAP1-202ENST00000423915 549 ntTSL 419.96■□□□□ 0.793e-6■■■■□ 20.3
XRN2Q9H0D6 MYADM-207ENST00000421337 1009 ntTSL 220.69■□□□□ 0.94e-6■■■■□ 20.3
XRN2Q9H0D6 MYADM-201ENST00000336967 3047 ntAPPRIS P1 TSL 2 BASIC12.3□□□□□ -0.444e-6■■■■□ 20.3
XRN2Q9H0D6 AARS-207ENST00000569825 871 ntTSL 219.48■□□□□ 0.714e-7■■■■□ 20.3
XRN2Q9H0D6 ATN1-201ENST00000356654 4351 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.137e-10■■■■□ 20.3
XRN2Q9H0D6 QSER1-201ENST00000399302 9335 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.682e-7■■■■□ 20.2
XRN2Q9H0D6 QSER1-203ENST00000527250 448 ntTSL 32.9□□□□□ -1.952e-7■■■■□ 20.2
XRN2Q9H0D6 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.84e-7■■■■□ 20.2
XRN2Q9H0D6 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC19.89■□□□□ 0.774e-7■■■■□ 20.2
XRN2Q9H0D6 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC17.61■□□□□ 0.414e-7■■■■□ 20.2
XRN2Q9H0D6 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC16.9■□□□□ 0.34e-7■■■■□ 20.2
XRN2Q9H0D6 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.154e-7■■■■□ 20.2
XRN2Q9H0D6 ALDOA-204ENST00000412304 1603 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.114e-7■■■■□ 20.2
XRN2Q9H0D6 ALDOA-209ENST00000563060 1550 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.084e-7■■■■□ 20.2
XRN2Q9H0D6 ALDOA-202ENST00000395240 1447 ntAPPRIS ALT1 TSL 5 BASIC15.34■□□□□ 0.054e-7■■■■□ 20.2
XRN2Q9H0D6 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC15.34■□□□□ 0.054e-7■■■■□ 20.2
XRN2Q9H0D6 ALDOA-213ENST00000564595 1663 ntTSL 2 BASIC14.86□□□□□ -0.034e-7■■■■□ 20.2
XRN2Q9H0D6 ALDOA-203ENST00000395248 2447 ntTSL 5 BASIC14.64□□□□□ -0.074e-7■■■■□ 20.2
XRN2Q9H0D6 ALDOA-211ENST00000564521 2534 ntTSL 512.71□□□□□ -0.374e-7■■■■□ 20.2
XRN2Q9H0D6 RPL13A-205ENST00000474171 521 ntTSL 213.5□□□□□ -0.252e-25■■■■□ 20.2
XRN2Q9H0D6 RPL13A-207ENST00000476300 619 ntTSL 311.05□□□□□ -0.642e-25■■■■□ 20.2
XRN2Q9H0D6 RPL13A-208ENST00000477613 796 ntTSL 520.74■□□□□ 0.919e-14■■■■□ 20.2
XRN2Q9H0D6 RPL13A-211ENST00000486930 652 ntTSL 318.7■□□□□ 0.583e-13■■■■□ 20.2
XRN2Q9H0D6 RPL13A-209ENST00000479992 850 ntTSL 318.57■□□□□ 0.569e-14■■■■□ 20.2
XRN2Q9H0D6 RPL13A-201ENST00000391857 1181 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.59e-14■■■■□ 20.2
XRN2Q9H0D6 RPL13A-214ENST00000624069 1122 ntTSL 1 (best)18.16■□□□□ 0.59e-14■■■■□ 20.2
XRN2Q9H0D6 RPL13A-202ENST00000467825 660 ntTSL 517.99■□□□□ 0.479e-14■■■■□ 20.2
XRN2Q9H0D6 RPL13A-204ENST00000472481 728 ntTSL 217.61■□□□□ 0.413e-13■■■■□ 20.2
XRN2Q9H0D6 RPL13A-210ENST00000484279 794 ntTSL 516.28■□□□□ 0.29e-14■■■■□ 20.2
XRN2Q9H0D6 RPL13A-213ENST00000621674 1098 ntTSL 5 BASIC16.28■□□□□ 0.29e-14■■■■□ 20.2
XRN2Q9H0D6 RPL13A-212ENST00000488946 2312 ntTSL 214.57□□□□□ -0.089e-14■■■■□ 20.2
XRN2Q9H0D6 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.143e-7■■■■□ 20.2
XRN2Q9H0D6 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.39e-18■■■■□ 20.2
XRN2Q9H0D6 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC23.14■■□□□ 1.299e-18■■■■□ 20.2
XRN2Q9H0D6 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC22.06■■□□□ 1.129e-18■■■■□ 20.2
XRN2Q9H0D6 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.47e-6■■■■□ 20.2
XRN2Q9H0D6 HIGD1A-202ENST00000418900 1322 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.339e-18■■■■□ 20.2
XRN2Q9H0D6 HIGD1A-203ENST00000430190 741 ntTSL 2 BASIC16.58■□□□□ 0.249e-18■■■■□ 20.2
XRN2Q9H0D6 HIGD1A-205ENST00000470543 983 ntTSL 215.63■□□□□ 0.099e-18■■■■□ 20.2
XRN2Q9H0D6 GPT2-205ENST00000569193 3205 ntTSL 1 (best)12.75□□□□□ -0.379e-18■■■■□ 20.2
XRN2Q9H0D6 AC099329.1-201ENST00000625589 539 ntTSL 56.85□□□□□ -1.319e-18■■■■□ 20.2
XRN2Q9H0D6 CDC42EP1-203ENST00000430687 720 ntAPPRIS ALT2 TSL 320.65■□□□□ 0.99e-7■■■■□ 20.2
XRN2Q9H0D6 STK11-203ENST00000585748 746 ntTSL 315.19■□□□□ 0.026e-9■■■■□ 20.2
XRN2Q9H0D6 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 15e-9■■■■□ 20.2
XRN2Q9H0D6 HINT1-209ENST00000513345 656 ntTSL 218.38■□□□□ 0.535e-9■■■■□ 20.2
XRN2Q9H0D6 HINT1-206ENST00000508495 825 ntTSL 1 (best)17.49■□□□□ 0.395e-9■■■■□ 20.2
XRN2Q9H0D6 HINT1-205ENST00000508488 703 ntTSL 2 BASIC16.18■□□□□ 0.185e-9■■■■□ 20.2
XRN2Q9H0D6 HINT1-204ENST00000506908 681 ntTSL 2 BASIC14.81□□□□□ -0.045e-9■■■■□ 20.2
XRN2Q9H0D6 HINT1-208ENST00000513012 583 ntTSL 4 BASIC13.93□□□□□ -0.185e-9■■■■□ 20.2
XRN2Q9H0D6 HINT1-207ENST00000511475 923 ntTSL 312.69□□□□□ -0.385e-9■■■■□ 20.2
XRN2Q9H0D6 HINT1-203ENST00000506207 369 ntTSL 57.17□□□□□ -1.265e-9■■■■□ 20.2
XRN2Q9H0D6 HINT1-202ENST00000504202 619 ntTSL 54.18□□□□□ -1.745e-9■■■■□ 20.2
XRN2Q9H0D6 ATXN7L3-207ENST00000589805 622 ntTSL 321.3■■□□□ 13e-6■■■■□ 20.2
XRN2Q9H0D6 TSPAN4-217ENST00000527644 968 ntTSL 231.12■■■□□ 2.572e-6■■■■□ 20.2
XRN2Q9H0D6 THUMPD3-AS1-204ENST00000480904 493 ntTSL 35.55□□□□□ -1.522e-9■■■■□ 20.2
XRN2Q9H0D6 SNHG26-201ENST00000415611 1099 ntTSL 5 BASIC12.63□□□□□ -0.397e-15■■■■□ 20.2
XRN2Q9H0D6 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC19.93■□□□□ 0.786e-7■■■■□ 20.1
XRN2Q9H0D6 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.576e-7■■■■□ 20.1
XRN2Q9H0D6 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC18.37■□□□□ 0.536e-7■■■■□ 20.1
XRN2Q9H0D6 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC16.65■□□□□ 0.266e-7■■■■□ 20.1
XRN2Q9H0D6 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC15.67■□□□□ 0.16e-7■■■■□ 20.1
XRN2Q9H0D6 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.131e-6■■■■□ 20.1
XRN2Q9H0D6 TRIM47-205ENST00000587774 720 ntTSL 222.7■■□□□ 1.222e-7■■■■□ 20.1
XRN2Q9H0D6 TRIM47-204ENST00000587339 1907 ntTSL 1 (best)21.12■□□□□ 0.972e-7■■■■□ 20.1
XRN2Q9H0D6 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.812e-7■■■■□ 20.1
XRN2Q9H0D6 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.011e-6■■■■□ 20.1
XRN2Q9H0D6 MAP3K11-203ENST00000524856 3787 ntTSL 214.1□□□□□ -0.151e-6■■■■□ 20.1
XRN2Q9H0D6 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC22.81■■□□□ 1.246e-9■■■■□ 20.1
XRN2Q9H0D6 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC19.89■□□□□ 0.776e-9■■■■□ 20.1
XRN2Q9H0D6 AFDN-205ENST00000392108 6812 ntTSL 1 (best) BASIC14.38□□□□□ -0.116e-9■■■■□ 20.1
XRN2Q9H0D6 AFDN-211ENST00000447894 5475 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.146e-9■■■■□ 20.1
XRN2Q9H0D6 AFDN-206ENST00000392112 7459 ntTSL 5 BASIC13.4□□□□□ -0.266e-9■■■■□ 20.1
XRN2Q9H0D6 AFDN-207ENST00000400822 7593 ntTSL 5 BASIC10.84□□□□□ -0.676e-9■■■■□ 20.1
XRN2Q9H0D6 AFDN-204ENST00000366809 4839 ntTSL 1 (best)9.84□□□□□ -0.836e-9■■■■□ 20.1
XRN2Q9H0D6 C7orf43-203ENST00000419037 2200 ntTSL 522.67■■□□□ 1.228e-10■■■■□ 20.1
XRN2Q9H0D6 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.918e-10■■■■□ 20.1
XRN2Q9H0D6 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC20.31■□□□□ 0.848e-10■■■■□ 20.1
XRN2Q9H0D6 DAZAP1-207ENST00000589484 3414 ntTSL 212.91□□□□□ -0.342e-7■■■■□ 20.1
XRN2Q9H0D6 ASNS-207ENST00000437657 745 ntTSL 59.34□□□□□ -0.912e-6■■■■□ 20.1
XRN2Q9H0D6 RBM19-205ENST00000552384 588 ntTSL 324.48■■□□□ 1.512e-24■■■■□ 20.1
XRN2Q9H0D6 RBM19-201ENST00000261741 4194 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.492e-24■■■■□ 20.1
XRN2Q9H0D6 RBM19-202ENST00000392561 3574 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.582e-24■■■■□ 20.1
XRN2Q9H0D6 RBM19-203ENST00000545145 4422 ntAPPRIS P1 TSL 2 BASIC9.71□□□□□ -0.852e-24■■■■□ 20.1
XRN2Q9H0D6 EIF4A1-235ENST00000584860 1109 ntTSL 316■□□□□ 0.151e-8■■■■□ 20.1
XRN2Q9H0D6 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC19.37■□□□□ 0.691e-6■■■■□ 20.1
XRN2Q9H0D6 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.381e-6■■■■□ 20.1
XRN2Q9H0D6 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.311e-6■■■■□ 20.1
Retrieved 100 of 21,068 protein–RNA pairs in 100.9 ms