Protein–RNA interactions for Protein: Q9H0A8

COMMD4, COMM domain-containing protein 4, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4Q9H0A8 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
COMMD4Q9H0A8 AC116351.2-201ENST00000606540 1585 ntBASIC17.08■□□□□ 0.32
COMMD4Q9H0A8 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC17.08■□□□□ 0.32
COMMD4Q9H0A8 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
COMMD4Q9H0A8 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
COMMD4Q9H0A8 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
COMMD4Q9H0A8 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC17.08■□□□□ 0.32
COMMD4Q9H0A8 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
COMMD4Q9H0A8 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC17.08■□□□□ 0.32
COMMD4Q9H0A8 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC17.08■□□□□ 0.32
COMMD4Q9H0A8 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC17.08■□□□□ 0.32
COMMD4Q9H0A8 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC17.08■□□□□ 0.32
COMMD4Q9H0A8 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC17.08■□□□□ 0.32
COMMD4Q9H0A8 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC17.08■□□□□ 0.32
COMMD4Q9H0A8 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC17.08■□□□□ 0.32
COMMD4Q9H0A8 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC17.08■□□□□ 0.32
COMMD4Q9H0A8 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC17.08■□□□□ 0.32
COMMD4Q9H0A8 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC17.08■□□□□ 0.32
COMMD4Q9H0A8 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
COMMD4Q9H0A8 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC17.08■□□□□ 0.32
COMMD4Q9H0A8 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC17.08■□□□□ 0.32
COMMD4Q9H0A8 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC17.08■□□□□ 0.32
COMMD4Q9H0A8 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
COMMD4Q9H0A8 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
COMMD4Q9H0A8 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
COMMD4Q9H0A8 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
COMMD4Q9H0A8 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
COMMD4Q9H0A8 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC17.07■□□□□ 0.32
COMMD4Q9H0A8 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
COMMD4Q9H0A8 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
COMMD4Q9H0A8 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
COMMD4Q9H0A8 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
COMMD4Q9H0A8 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
COMMD4Q9H0A8 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
COMMD4Q9H0A8 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
COMMD4Q9H0A8 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
COMMD4Q9H0A8 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
COMMD4Q9H0A8 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
COMMD4Q9H0A8 AC006015.1-201ENST00000429970 570 ntBASIC17.07■□□□□ 0.32
COMMD4Q9H0A8 AC011767.1-201ENST00000617410 1153 ntBASIC17.07■□□□□ 0.32
COMMD4Q9H0A8 OR10C1-204ENST00000622521 1039 ntBASIC17.07■□□□□ 0.32
COMMD4Q9H0A8 AC231657.2-201ENST00000624556 255 ntBASIC17.07■□□□□ 0.32
COMMD4Q9H0A8 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC17.07■□□□□ 0.32
COMMD4Q9H0A8 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
COMMD4Q9H0A8 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
COMMD4Q9H0A8 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
COMMD4Q9H0A8 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
COMMD4Q9H0A8 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC17.07■□□□□ 0.32
COMMD4Q9H0A8 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
COMMD4Q9H0A8 AC141586.3-201ENST00000562166 1838 ntBASIC17.07■□□□□ 0.32
COMMD4Q9H0A8 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
COMMD4Q9H0A8 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
COMMD4Q9H0A8 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
COMMD4Q9H0A8 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC17.07■□□□□ 0.32
COMMD4Q9H0A8 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
COMMD4Q9H0A8 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC17.07■□□□□ 0.32
COMMD4Q9H0A8 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC17.07■□□□□ 0.32
COMMD4Q9H0A8 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
COMMD4Q9H0A8 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
COMMD4Q9H0A8 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC17.06■□□□□ 0.32
COMMD4Q9H0A8 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
COMMD4Q9H0A8 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
COMMD4Q9H0A8 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC17.06■□□□□ 0.32
COMMD4Q9H0A8 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC17.06■□□□□ 0.32
COMMD4Q9H0A8 AC010980.2-201ENST00000587099 1412 ntBASIC17.06■□□□□ 0.32
COMMD4Q9H0A8 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
COMMD4Q9H0A8 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
COMMD4Q9H0A8 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
COMMD4Q9H0A8 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
COMMD4Q9H0A8 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
COMMD4Q9H0A8 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
COMMD4Q9H0A8 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
COMMD4Q9H0A8 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC17.06■□□□□ 0.32
COMMD4Q9H0A8 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC17.06■□□□□ 0.32
COMMD4Q9H0A8 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
COMMD4Q9H0A8 CALM3-202ENST00000391918 702 ntTSL 2 BASIC17.06■□□□□ 0.32
COMMD4Q9H0A8 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
COMMD4Q9H0A8 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
COMMD4Q9H0A8 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC17.06■□□□□ 0.32
COMMD4Q9H0A8 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC17.06■□□□□ 0.32
COMMD4Q9H0A8 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC17.06■□□□□ 0.32
COMMD4Q9H0A8 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC17.06■□□□□ 0.32
COMMD4Q9H0A8 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC17.06■□□□□ 0.32
COMMD4Q9H0A8 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
COMMD4Q9H0A8 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
COMMD4Q9H0A8 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
COMMD4Q9H0A8 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC17.06■□□□□ 0.32
COMMD4Q9H0A8 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
COMMD4Q9H0A8 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
COMMD4Q9H0A8 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC17.06■□□□□ 0.32
COMMD4Q9H0A8 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
COMMD4Q9H0A8 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
COMMD4Q9H0A8 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
COMMD4Q9H0A8 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
COMMD4Q9H0A8 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
COMMD4Q9H0A8 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC17.05■□□□□ 0.32
COMMD4Q9H0A8 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
COMMD4Q9H0A8 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
COMMD4Q9H0A8 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
COMMD4Q9H0A8 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 24.4 ms