Protein–RNA interactions for Protein: Q9GZS1

POLR1E, DNA-directed RNA polymerase I subunit RPA49, humanhuman

Known RBP Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1EQ9GZS1 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC19.63■□□□□ 0.73
POLR1EQ9GZS1 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC19.63■□□□□ 0.73
POLR1EQ9GZS1 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
POLR1EQ9GZS1 MME-217ENST00000616757 1315 ntTSL 5 BASIC19.63■□□□□ 0.73
POLR1EQ9GZS1 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
POLR1EQ9GZS1 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
POLR1EQ9GZS1 FDX2-207ENST00000494368 584 ntTSL 4 BASIC19.63■□□□□ 0.73
POLR1EQ9GZS1 AL445675.2-201ENST00000620291 557 ntBASIC19.63■□□□□ 0.73
POLR1EQ9GZS1 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
POLR1EQ9GZS1 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
POLR1EQ9GZS1 AC007952.6-201ENST00000573168 2673 ntBASIC19.63■□□□□ 0.73
POLR1EQ9GZS1 AC003957.1-201ENST00000625108 2673 ntBASIC19.63■□□□□ 0.73
POLR1EQ9GZS1 AC116562.4-201ENST00000641316 2276 ntBASIC19.63■□□□□ 0.73
POLR1EQ9GZS1 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
POLR1EQ9GZS1 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
POLR1EQ9GZS1 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
POLR1EQ9GZS1 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
POLR1EQ9GZS1 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
POLR1EQ9GZS1 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
POLR1EQ9GZS1 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC19.62■□□□□ 0.73
POLR1EQ9GZS1 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC19.62■□□□□ 0.73
POLR1EQ9GZS1 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC19.62■□□□□ 0.73
POLR1EQ9GZS1 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC19.62■□□□□ 0.73
POLR1EQ9GZS1 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
POLR1EQ9GZS1 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
POLR1EQ9GZS1 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
POLR1EQ9GZS1 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
POLR1EQ9GZS1 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
POLR1EQ9GZS1 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
POLR1EQ9GZS1 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC19.62■□□□□ 0.73
POLR1EQ9GZS1 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC19.62■□□□□ 0.73
POLR1EQ9GZS1 KSR1P1-201ENST00000446298 240 ntBASIC19.62■□□□□ 0.73
POLR1EQ9GZS1 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
POLR1EQ9GZS1 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
POLR1EQ9GZS1 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC19.62■□□□□ 0.73
POLR1EQ9GZS1 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC19.62■□□□□ 0.73
POLR1EQ9GZS1 AL160286.2-201ENST00000567150 934 ntBASIC19.62■□□□□ 0.73
POLR1EQ9GZS1 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC19.62■□□□□ 0.73
POLR1EQ9GZS1 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC19.62■□□□□ 0.73
POLR1EQ9GZS1 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC19.62■□□□□ 0.73
POLR1EQ9GZS1 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC19.62■□□□□ 0.73
POLR1EQ9GZS1 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC19.61■□□□□ 0.73
POLR1EQ9GZS1 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
POLR1EQ9GZS1 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC19.61■□□□□ 0.73
POLR1EQ9GZS1 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC19.61■□□□□ 0.73
POLR1EQ9GZS1 LINC01465-201ENST00000408887 1940 ntBASIC19.61■□□□□ 0.73
POLR1EQ9GZS1 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
POLR1EQ9GZS1 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC19.61■□□□□ 0.73
POLR1EQ9GZS1 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
POLR1EQ9GZS1 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC19.61■□□□□ 0.73
POLR1EQ9GZS1 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
POLR1EQ9GZS1 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC19.61■□□□□ 0.73
POLR1EQ9GZS1 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
POLR1EQ9GZS1 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
POLR1EQ9GZS1 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC19.61■□□□□ 0.73
POLR1EQ9GZS1 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC19.61■□□□□ 0.73
POLR1EQ9GZS1 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC19.61■□□□□ 0.73
POLR1EQ9GZS1 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
POLR1EQ9GZS1 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC19.61■□□□□ 0.73
POLR1EQ9GZS1 RPS15-203ENST00000586096 570 ntTSL 2 BASIC19.61■□□□□ 0.73
POLR1EQ9GZS1 USP36-216ENST00000589424 970 ntTSL 5 BASIC19.61■□□□□ 0.73
POLR1EQ9GZS1 AC073195.1-201ENST00000607241 877 ntBASIC19.61■□□□□ 0.73
POLR1EQ9GZS1 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC19.61■□□□□ 0.73
POLR1EQ9GZS1 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC19.61■□□□□ 0.73
POLR1EQ9GZS1 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC19.61■□□□□ 0.73
POLR1EQ9GZS1 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
POLR1EQ9GZS1 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
POLR1EQ9GZS1 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
POLR1EQ9GZS1 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC19.61■□□□□ 0.73
POLR1EQ9GZS1 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
POLR1EQ9GZS1 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
POLR1EQ9GZS1 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
POLR1EQ9GZS1 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
POLR1EQ9GZS1 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
POLR1EQ9GZS1 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC19.6■□□□□ 0.73
POLR1EQ9GZS1 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
POLR1EQ9GZS1 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
POLR1EQ9GZS1 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
POLR1EQ9GZS1 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC19.6■□□□□ 0.73
POLR1EQ9GZS1 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
POLR1EQ9GZS1 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
POLR1EQ9GZS1 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
POLR1EQ9GZS1 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
POLR1EQ9GZS1 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
POLR1EQ9GZS1 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC19.6■□□□□ 0.73
POLR1EQ9GZS1 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC19.6■□□□□ 0.73
POLR1EQ9GZS1 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC19.6■□□□□ 0.73
POLR1EQ9GZS1 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC19.6■□□□□ 0.73
POLR1EQ9GZS1 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
POLR1EQ9GZS1 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
POLR1EQ9GZS1 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
POLR1EQ9GZS1 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
POLR1EQ9GZS1 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
POLR1EQ9GZS1 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC19.6■□□□□ 0.73
POLR1EQ9GZS1 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
POLR1EQ9GZS1 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC19.59■□□□□ 0.73
POLR1EQ9GZS1 SDHAP1-207ENST00000440850 2000 ntBASIC19.59■□□□□ 0.73
POLR1EQ9GZS1 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC19.59■□□□□ 0.73
POLR1EQ9GZS1 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
POLR1EQ9GZS1 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms