Protein–RNA interactions for Protein: Q8TDM0

BCAS4, Breast carcinoma-amplified sequence 4, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BCAS4Q8TDM0 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
BCAS4Q8TDM0 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
BCAS4Q8TDM0 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
BCAS4Q8TDM0 SERBP1P1-201ENST00000396021 1160 ntBASIC19.44■□□□□ 0.7
BCAS4Q8TDM0 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC19.44■□□□□ 0.7
BCAS4Q8TDM0 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
BCAS4Q8TDM0 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC19.44■□□□□ 0.7
BCAS4Q8TDM0 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC19.44■□□□□ 0.7
BCAS4Q8TDM0 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
BCAS4Q8TDM0 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC19.44■□□□□ 0.7
BCAS4Q8TDM0 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC19.44■□□□□ 0.7
BCAS4Q8TDM0 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC19.44■□□□□ 0.7
BCAS4Q8TDM0 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC19.44■□□□□ 0.7
BCAS4Q8TDM0 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
BCAS4Q8TDM0 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
BCAS4Q8TDM0 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
BCAS4Q8TDM0 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
BCAS4Q8TDM0 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
BCAS4Q8TDM0 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
BCAS4Q8TDM0 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
BCAS4Q8TDM0 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC19.43■□□□□ 0.7
BCAS4Q8TDM0 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC19.43■□□□□ 0.7
BCAS4Q8TDM0 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
BCAS4Q8TDM0 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC19.43■□□□□ 0.7
BCAS4Q8TDM0 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC19.43■□□□□ 0.7
BCAS4Q8TDM0 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
BCAS4Q8TDM0 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
BCAS4Q8TDM0 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC19.43■□□□□ 0.7
BCAS4Q8TDM0 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
BCAS4Q8TDM0 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC19.43■□□□□ 0.7
BCAS4Q8TDM0 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC19.43■□□□□ 0.7
BCAS4Q8TDM0 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC19.43■□□□□ 0.7
BCAS4Q8TDM0 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
BCAS4Q8TDM0 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
BCAS4Q8TDM0 SNX3-202ENST00000349379 890 ntTSL 2 BASIC19.43■□□□□ 0.7
BCAS4Q8TDM0 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
BCAS4Q8TDM0 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
BCAS4Q8TDM0 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
BCAS4Q8TDM0 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
BCAS4Q8TDM0 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
BCAS4Q8TDM0 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
BCAS4Q8TDM0 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC19.43■□□□□ 0.7
BCAS4Q8TDM0 LINC00896-202ENST00000609602 2128 ntBASIC19.43■□□□□ 0.7
BCAS4Q8TDM0 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
BCAS4Q8TDM0 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC19.43■□□□□ 0.7
BCAS4Q8TDM0 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
BCAS4Q8TDM0 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
BCAS4Q8TDM0 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
BCAS4Q8TDM0 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
BCAS4Q8TDM0 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC19.43■□□□□ 0.7
BCAS4Q8TDM0 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
BCAS4Q8TDM0 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
BCAS4Q8TDM0 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC19.42■□□□□ 0.7
BCAS4Q8TDM0 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
BCAS4Q8TDM0 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC19.42■□□□□ 0.7
BCAS4Q8TDM0 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
BCAS4Q8TDM0 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC19.42■□□□□ 0.7
BCAS4Q8TDM0 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
BCAS4Q8TDM0 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC19.42■□□□□ 0.7
BCAS4Q8TDM0 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
BCAS4Q8TDM0 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC19.42■□□□□ 0.7
BCAS4Q8TDM0 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC19.42■□□□□ 0.7
BCAS4Q8TDM0 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC19.42■□□□□ 0.7
BCAS4Q8TDM0 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC19.42■□□□□ 0.7
BCAS4Q8TDM0 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
BCAS4Q8TDM0 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
BCAS4Q8TDM0 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC19.42■□□□□ 0.7
BCAS4Q8TDM0 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
BCAS4Q8TDM0 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
BCAS4Q8TDM0 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC19.42■□□□□ 0.7
BCAS4Q8TDM0 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
BCAS4Q8TDM0 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC19.42■□□□□ 0.7
BCAS4Q8TDM0 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC19.42■□□□□ 0.7
BCAS4Q8TDM0 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC19.42■□□□□ 0.7
BCAS4Q8TDM0 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC19.42■□□□□ 0.7
BCAS4Q8TDM0 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
BCAS4Q8TDM0 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
BCAS4Q8TDM0 KRT16P2-201ENST00000414673 1423 ntBASIC19.42■□□□□ 0.7
BCAS4Q8TDM0 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
BCAS4Q8TDM0 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
BCAS4Q8TDM0 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
BCAS4Q8TDM0 BCL2-203ENST00000589955 5011 ntBASIC19.41■□□□□ 0.7
BCAS4Q8TDM0 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC19.41■□□□□ 0.7
BCAS4Q8TDM0 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
BCAS4Q8TDM0 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
BCAS4Q8TDM0 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC19.41■□□□□ 0.7
BCAS4Q8TDM0 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC19.41■□□□□ 0.7
BCAS4Q8TDM0 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC19.41■□□□□ 0.7
BCAS4Q8TDM0 FAM21FP-204ENST00000608637 956 ntBASIC19.41■□□□□ 0.7
BCAS4Q8TDM0 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
BCAS4Q8TDM0 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
BCAS4Q8TDM0 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
BCAS4Q8TDM0 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
BCAS4Q8TDM0 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
BCAS4Q8TDM0 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
BCAS4Q8TDM0 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
BCAS4Q8TDM0 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
BCAS4Q8TDM0 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC19.41■□□□□ 0.7
BCAS4Q8TDM0 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
BCAS4Q8TDM0 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 35 ms