Protein–RNA interactions for Protein: Q8NHU2

CFAP61, Cilia- and flagella-associated protein 61, humanhuman

Predictions only

Length 1,237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP61Q8NHU2 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
CFAP61Q8NHU2 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CFAP61Q8NHU2 GGT1-206ENST00000404223 952 ntTSL 2 BASIC19.55■□□□□ 0.72
CFAP61Q8NHU2 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
CFAP61Q8NHU2 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC19.55■□□□□ 0.72
CFAP61Q8NHU2 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC19.55■□□□□ 0.72
CFAP61Q8NHU2 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC19.55■□□□□ 0.72
CFAP61Q8NHU2 AC023632.3-201ENST00000521633 145 ntBASIC19.55■□□□□ 0.72
CFAP61Q8NHU2 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CFAP61Q8NHU2 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
CFAP61Q8NHU2 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC19.55■□□□□ 0.72
CFAP61Q8NHU2 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
CFAP61Q8NHU2 AC060766.5-201ENST00000590539 871 ntBASIC19.55■□□□□ 0.72
CFAP61Q8NHU2 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC19.55■□□□□ 0.72
CFAP61Q8NHU2 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC19.55■□□□□ 0.72
CFAP61Q8NHU2 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CFAP61Q8NHU2 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CFAP61Q8NHU2 HLA-B-256ENST00000639848 1089 ntBASIC19.55■□□□□ 0.72
CFAP61Q8NHU2 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
CFAP61Q8NHU2 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC19.55■□□□□ 0.72
CFAP61Q8NHU2 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CFAP61Q8NHU2 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
CFAP61Q8NHU2 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC19.55■□□□□ 0.72
CFAP61Q8NHU2 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CFAP61Q8NHU2 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC19.55■□□□□ 0.72
CFAP61Q8NHU2 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC19.54■□□□□ 0.72
CFAP61Q8NHU2 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
CFAP61Q8NHU2 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
CFAP61Q8NHU2 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC19.54■□□□□ 0.72
CFAP61Q8NHU2 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CFAP61Q8NHU2 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
CFAP61Q8NHU2 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC19.54■□□□□ 0.72
CFAP61Q8NHU2 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
CFAP61Q8NHU2 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC19.54■□□□□ 0.72
CFAP61Q8NHU2 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC19.54■□□□□ 0.72
CFAP61Q8NHU2 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC19.54■□□□□ 0.72
CFAP61Q8NHU2 PNMA6B-201ENST00000538162 1200 ntBASIC19.54■□□□□ 0.72
CFAP61Q8NHU2 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
CFAP61Q8NHU2 KRT18P6-201ENST00000555540 1265 ntBASIC19.54■□□□□ 0.72
CFAP61Q8NHU2 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CFAP61Q8NHU2 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC19.54■□□□□ 0.72
CFAP61Q8NHU2 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC19.54■□□□□ 0.72
CFAP61Q8NHU2 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CFAP61Q8NHU2 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC19.54■□□□□ 0.72
CFAP61Q8NHU2 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
CFAP61Q8NHU2 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CFAP61Q8NHU2 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC19.54■□□□□ 0.72
CFAP61Q8NHU2 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC19.54■□□□□ 0.72
CFAP61Q8NHU2 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
CFAP61Q8NHU2 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
CFAP61Q8NHU2 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC19.53■□□□□ 0.72
CFAP61Q8NHU2 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CFAP61Q8NHU2 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
CFAP61Q8NHU2 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC19.53■□□□□ 0.72
CFAP61Q8NHU2 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC19.53■□□□□ 0.72
CFAP61Q8NHU2 BX119927.1-201ENST00000636596 1552 ntBASIC19.53■□□□□ 0.72
CFAP61Q8NHU2 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
CFAP61Q8NHU2 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CFAP61Q8NHU2 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
CFAP61Q8NHU2 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC19.53■□□□□ 0.72
CFAP61Q8NHU2 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CFAP61Q8NHU2 DENND3-207ENST00000518347 850 ntTSL 2 BASIC19.53■□□□□ 0.72
CFAP61Q8NHU2 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CFAP61Q8NHU2 AC005829.2-201ENST00000571422 1056 ntBASIC19.53■□□□□ 0.72
CFAP61Q8NHU2 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
CFAP61Q8NHU2 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CFAP61Q8NHU2 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
CFAP61Q8NHU2 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
CFAP61Q8NHU2 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC19.53■□□□□ 0.72
CFAP61Q8NHU2 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC19.53■□□□□ 0.72
CFAP61Q8NHU2 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC19.53■□□□□ 0.72
CFAP61Q8NHU2 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
CFAP61Q8NHU2 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CFAP61Q8NHU2 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CFAP61Q8NHU2 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC19.53■□□□□ 0.72
CFAP61Q8NHU2 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC19.53■□□□□ 0.72
CFAP61Q8NHU2 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
CFAP61Q8NHU2 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CFAP61Q8NHU2 KRT16P6-202ENST00000425692 1426 ntBASIC19.52■□□□□ 0.72
CFAP61Q8NHU2 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
CFAP61Q8NHU2 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CFAP61Q8NHU2 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CFAP61Q8NHU2 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
CFAP61Q8NHU2 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CFAP61Q8NHU2 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CFAP61Q8NHU2 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CFAP61Q8NHU2 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CFAP61Q8NHU2 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CFAP61Q8NHU2 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CFAP61Q8NHU2 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC19.52■□□□□ 0.72
CFAP61Q8NHU2 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC19.52■□□□□ 0.72
CFAP61Q8NHU2 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC19.52■□□□□ 0.72
CFAP61Q8NHU2 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC19.52■□□□□ 0.72
CFAP61Q8NHU2 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC19.52■□□□□ 0.72
CFAP61Q8NHU2 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC19.52■□□□□ 0.72
CFAP61Q8NHU2 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CFAP61Q8NHU2 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC19.52■□□□□ 0.71
CFAP61Q8NHU2 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.71
CFAP61Q8NHU2 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
CFAP61Q8NHU2 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 18.6 ms