Protein–RNA interactions for Protein: Q8NFR3

SPTSSB, Serine palmitoyltransferase small subunit B, humanhuman

Predictions only

Length 76 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTSSBQ8NFR3 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
SPTSSBQ8NFR3 B3GAT2-201ENST00000230053 6565 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
SPTSSBQ8NFR3 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
SPTSSBQ8NFR3 RIC1-204ENST00000418622 6658 ntTSL 5 BASIC10.63□□□□□ -0.71
SPTSSBQ8NFR3 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
SPTSSBQ8NFR3 EIF4G3-204ENST00000374935 5567 ntAPPRIS ALT2 TSL 5 BASIC10.63□□□□□ -0.71
SPTSSBQ8NFR3 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC10.63□□□□□ -0.71
SPTSSBQ8NFR3 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
SPTSSBQ8NFR3 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC10.63□□□□□ -0.71
SPTSSBQ8NFR3 POM121-201ENST00000358357 5320 ntAPPRIS P3 TSL 1 (best) BASIC10.63□□□□□ -0.71
SPTSSBQ8NFR3 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
SPTSSBQ8NFR3 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
SPTSSBQ8NFR3 AL390961.4-201ENST00000623958 2535 ntBASIC10.62□□□□□ -0.71
SPTSSBQ8NFR3 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
SPTSSBQ8NFR3 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC10.62□□□□□ -0.71
SPTSSBQ8NFR3 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC10.62□□□□□ -0.71
SPTSSBQ8NFR3 IGF2BP1-201ENST00000290341 8274 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
SPTSSBQ8NFR3 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC10.62□□□□□ -0.71
SPTSSBQ8NFR3 KIF1A-213ENST00000498729 9221 ntTSL 5 BASIC10.62□□□□□ -0.71
SPTSSBQ8NFR3 ABCA2-203ENST00000371605 8151 ntAPPRIS ALT2 TSL 2 BASIC10.62□□□□□ -0.71
SPTSSBQ8NFR3 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC10.62□□□□□ -0.71
SPTSSBQ8NFR3 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC10.62□□□□□ -0.71
SPTSSBQ8NFR3 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC10.62□□□□□ -0.71
SPTSSBQ8NFR3 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
SPTSSBQ8NFR3 IGSF1-204ENST00000370903 4594 ntAPPRIS ALT2 TSL 1 (best) BASIC10.62□□□□□ -0.71
SPTSSBQ8NFR3 MYO3A-201ENST00000265944 5581 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
SPTSSBQ8NFR3 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
SPTSSBQ8NFR3 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC10.62□□□□□ -0.71
SPTSSBQ8NFR3 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC10.62□□□□□ -0.71
SPTSSBQ8NFR3 HES4-204ENST00000484667 667 ntTSL 3 BASIC10.62□□□□□ -0.71
SPTSSBQ8NFR3 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC10.62□□□□□ -0.71
SPTSSBQ8NFR3 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC10.62□□□□□ -0.71
SPTSSBQ8NFR3 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
SPTSSBQ8NFR3 AC060814.1-201ENST00000554326 538 ntBASIC10.62□□□□□ -0.71
SPTSSBQ8NFR3 AC026202.3-201ENST00000600805 1127 ntBASIC10.62□□□□□ -0.71
SPTSSBQ8NFR3 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC10.62□□□□□ -0.71
SPTSSBQ8NFR3 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC10.62□□□□□ -0.71
SPTSSBQ8NFR3 ARAP1-203ENST00000393605 4778 ntAPPRIS ALT2 TSL 1 (best) BASIC10.62□□□□□ -0.71
SPTSSBQ8NFR3 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
SPTSSBQ8NFR3 OAS3-201ENST00000228928 6719 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
SPTSSBQ8NFR3 SOGA3-201ENST00000465909 3756 ntTSL 5 BASIC10.62□□□□□ -0.71
SPTSSBQ8NFR3 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
SPTSSBQ8NFR3 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
SPTSSBQ8NFR3 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC10.62□□□□□ -0.71
SPTSSBQ8NFR3 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
SPTSSBQ8NFR3 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC10.62□□□□□ -0.71
SPTSSBQ8NFR3 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC10.62□□□□□ -0.71
SPTSSBQ8NFR3 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC10.62□□□□□ -0.71
SPTSSBQ8NFR3 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC10.62□□□□□ -0.71
SPTSSBQ8NFR3 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC10.62□□□□□ -0.71
SPTSSBQ8NFR3 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC10.62□□□□□ -0.71
SPTSSBQ8NFR3 MPPED2-202ENST00000448418 5591 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
SPTSSBQ8NFR3 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC10.62□□□□□ -0.71
SPTSSBQ8NFR3 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC10.62□□□□□ -0.71
SPTSSBQ8NFR3 RBM47-203ENST00000381795 4473 ntAPPRIS P3 TSL 2 BASIC10.62□□□□□ -0.71
SPTSSBQ8NFR3 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC10.62□□□□□ -0.71
SPTSSBQ8NFR3 SH3KBP1-205ENST00000397821 4731 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
SPTSSBQ8NFR3 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
SPTSSBQ8NFR3 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC10.62□□□□□ -0.71
SPTSSBQ8NFR3 ACE-204ENST00000428043 5120 ntTSL 2 BASIC10.62□□□□□ -0.71
SPTSSBQ8NFR3 FASN-201ENST00000306749 8565 ntAPPRIS P2 TSL 1 (best) BASIC10.61□□□□□ -0.71
SPTSSBQ8NFR3 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC10.61□□□□□ -0.71
SPTSSBQ8NFR3 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
SPTSSBQ8NFR3 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
SPTSSBQ8NFR3 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC10.61□□□□□ -0.71
SPTSSBQ8NFR3 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
SPTSSBQ8NFR3 SOAT1-203ENST00000539888 6794 ntTSL 2 BASIC10.61□□□□□ -0.71
SPTSSBQ8NFR3 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
SPTSSBQ8NFR3 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
SPTSSBQ8NFR3 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
SPTSSBQ8NFR3 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC10.61□□□□□ -0.71
SPTSSBQ8NFR3 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC10.61□□□□□ -0.71
SPTSSBQ8NFR3 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
SPTSSBQ8NFR3 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC10.61□□□□□ -0.71
SPTSSBQ8NFR3 GPD1L-201ENST00000282541 4060 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
SPTSSBQ8NFR3 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
SPTSSBQ8NFR3 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC10.61□□□□□ -0.71
SPTSSBQ8NFR3 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC10.61□□□□□ -0.71
SPTSSBQ8NFR3 TRIM45-201ENST00000256649 3515 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
SPTSSBQ8NFR3 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC10.61□□□□□ -0.71
SPTSSBQ8NFR3 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC10.61□□□□□ -0.71
SPTSSBQ8NFR3 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
SPTSSBQ8NFR3 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC10.61□□□□□ -0.71
SPTSSBQ8NFR3 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
SPTSSBQ8NFR3 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC10.61□□□□□ -0.71
SPTSSBQ8NFR3 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
SPTSSBQ8NFR3 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC10.61□□□□□ -0.71
SPTSSBQ8NFR3 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC10.61□□□□□ -0.71
SPTSSBQ8NFR3 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC10.61□□□□□ -0.71
SPTSSBQ8NFR3 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
SPTSSBQ8NFR3 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
SPTSSBQ8NFR3 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC10.61□□□□□ -0.71
SPTSSBQ8NFR3 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
SPTSSBQ8NFR3 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC10.61□□□□□ -0.71
SPTSSBQ8NFR3 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
SPTSSBQ8NFR3 USP47-202ENST00000339865 7775 ntTSL 2 BASIC10.61□□□□□ -0.71
SPTSSBQ8NFR3 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC10.61□□□□□ -0.71
SPTSSBQ8NFR3 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
SPTSSBQ8NFR3 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
SPTSSBQ8NFR3 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC10.61□□□□□ -0.71
Retrieved 100 of 98,524 protein–RNA pairs in 21.7 ms